Gene SbBS512_E1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1812 
Symbol 
ID6269066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1659898 
End bp1660977 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content53% 
IMG OID641725880 
Productputative oxidoreductase 
Protein accessionYP_001880378 
Protein GI187730396 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.984118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAAATA GCAATCATAC TTCAATGAGA GGCAATGACA TGAGCGACAA CATCCGTGTT 
GGGTTGATTG GGTATGGTTA TGCGAGCAAA ACCTTCCATG CGCCCCTGAT TGCGGGCACG
CCCGGGCTGG AACTGGCGGT AATCTCCAGC AGTGATGAAA CAAAAGTAAA AGCCGACTGG
CCAACGGTTA CGGTTGTCTC TGAGCCGAAG CATCTGTTTA ACGATCCCAA CATAGACCTG
ATTGTCATTC CTACACCCAA CGATACCCAT TTCCCGTTAG CCAAAGCGGC GCTTGAGGCG
GGTAAACATG TGGTCGTTGA TAAACCCTTT ACCGTGACAC TGTCACAAGC GCGAGAGCTG
GATGCGCTGG CAAAAAGCCT GGGGCGTGTG CTGTCTGTAT TCCATAACCG TCGTTGGGAT
AGCGATTTCT TGAAGCTAAA AGGTTTGCTC GCGGAAGGCG TGCTGGGTGA AGTTGCTTAC
TTTGAGTCTC ATTTTGACCG CTTCCGTCCG CAGGTGCGCG ATCGTTGGCG TGAACAGGGC
GGCCCAGGCA GCGGTATCTG GTACGATTTA GCACCGCATC TTCTTGATCA GGCCATTACG
CTATTTGGTT TACCGGTCAG CATGACGGTA GATTTGGCAC AGTTACGGCC CGGAGCGCAG
TCGACCGATT ATTTCCACGC CATCTTGTCC TATCCACAGC GGCGAGTCAT TTTACACGGT
ACCATGCTGG CAGCCGCTGA GTCAGCACGG TATATCGTGC ATGGATCCCG AGGCAGTTAT
GTGAAATATG GCCTCGATCC ACAGGAAGAA CGTCTGAAAA ATGGCGAGCG TCTGCCGCAG
GAAGACTGGG GCTACGATAT GCGTGATGGC GTACTTACCC GCGTGGAAGG TGAGGAACGT
GTCGAAGAAA CGCTGTTGAC GGTACCTGGG AATTATCCGG CTTACTATGC GGCTATTCGT
GATGCGTTAA ATGGCGATGG TGAAAATCCG GTTCCGGCAA GCCAGGCAAT CCAGGTAATG
GAGTTGATTG AGCTGGGCAT CGAATCCGCC AAACATCGCG CGACTTTGTG CCTTGCATGA
 
Protein sequence
MSNSNHTSMR GNDMSDNIRV GLIGYGYASK TFHAPLIAGT PGLELAVISS SDETKVKADW 
PTVTVVSEPK HLFNDPNIDL IVIPTPNDTH FPLAKAALEA GKHVVVDKPF TVTLSQAREL
DALAKSLGRV LSVFHNRRWD SDFLKLKGLL AEGVLGEVAY FESHFDRFRP QVRDRWREQG
GPGSGIWYDL APHLLDQAIT LFGLPVSMTV DLAQLRPGAQ STDYFHAILS YPQRRVILHG
TMLAAAESAR YIVHGSRGSY VKYGLDPQEE RLKNGERLPQ EDWGYDMRDG VLTRVEGEER
VEETLLTVPG NYPAYYAAIR DALNGDGENP VPASQAIQVM ELIELGIESA KHRATLCLA