| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1649 |
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| Symbol | mdoD |
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| ID | 6268685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1506047 |
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| End bp | 1507702 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641725738 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_001880236 |
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| Protein GI | 187730116 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGTA GACGATTTAT TAAAGGTTCA ATGGCTATGG CCGCCGTGTG CGGTACCAGC
GGCATTGCTT CTCTTTTTTC TCAGGCGGCA TTCGCGGCAG ATTCTGATAT TGCCGACGGG
CAAACCCAGC GTTTTGACTT CTCCATTCTA CAGTCAATGG CGCACGACTT AGCGCAAACA
GCGTGGCGTG GTGCGCCTCG TCCGTTACCT GACACGCTGG CGACAATGAC GCCGCAGGCT
TATAACAGTA TTCAATACGA CGCCGAAAAA TCGCTCTGGC ATAACGTTGA GAACCGTCAA
CTGGACGCTC AGTTCTTCCA TATGGGAATG GGATTCCGTC GCCGCGTTCG TATGTTTTCT
GTAGATCCAG CAACACATCT GGCGCGTGAA ATTCACTTTC GCCCGGAGTT GTTCAAATAC
AACGATGCGG GTGTTGATAC AAAACAATTA GAAGGGCAAA GCGATCTCGG CTTTGCCGGT
TTTCGCGTGT TTAAAGCCCC CGAACTGGCG CGCCGTGATG TAGTATCATT TCTCGGCGCG
AGTTATTTCC GCGCCGTTGA TGATACATAT CAATACGGTT TGTCGGCCCG CGGCCTGGCG
ATCGACACTT ACACCGACAG TAAAGAAGAG TTCCCCGACT TTACCGCCTT CTGGTTTGAT
ACGGTAAAAC CGGGGGCAAC TACCTTTACC GTTTATGCGT TGCTCGATAG CGCCAGCATT
ACTGGTGCCT ATAAGTTCAC TATCCATTGT GAGAAAAGTC AGGTGATTAT GGATGTGGAA
AATCACCTGT ATGCGCGCAA AGACATTAAA CAGCTGGGCA TTGCGCCGAT GACCAGTATG
TTCAGCTGCG GTACTAATGA ACGTCGGATG TGCGATACAA TTCATCCGCA AATTCATGAC
TCTGATCGTC TGTCCATGTG GCGGGGCAAC GGCGAGTGGA TTTGCCGTCC GCTGAATAAT
CCGCAAAAAT TGCAGTTCAA TGCTTACACC GACAACAACC CGAAAGGGTT TGGTTTATTG
CAACTGGATC GTGACTTCTC CCATTATCAG GACATTATGG GCTGGTATAA CAAACGCCCA
AGTCTGTGGC TGGAACCGCG TAACAAGTGG GGTAAGGGCA CCATCGGCCT GATGGAAATC
CCAACAACGG GCGAAACGCT GGATAACATT GTCTGTTTCT GGCAGCCAGA AAAAGCTGTA
AAAGCAGGTG ATGAGTTTGC ATTCCAGTAT CGTCTGTACT GGAGTGCGCA ACCGCCTGTT
CATTGCCCAT TAGCGCGCGT TATGGCGACG CGTACCGGCA TGGGCGGTTT CCCGGAAGGT
TGGGCGCCAG GTGAACACTA TCCCGAAAAA TGGGCGCGTC GTTTTGCCGT CGATTTCGTT
GGTGGTGATC TGAAAGCTGC CGCGCCAAAA GGCATTGAGC CGGTGATTAC GCTTTCCAGT
GGGGAAGCGA AGCAAATCGA AATTCTCTAT ATTGAACCCA TCGATGGTTA TCGTATTCAG
TTTGACTGGT ATCCGACTTC GGACTCCACT GATCCGGTCG ATATGCGGAT GTATCTACGT
TGTCAGGGGG ACGCTATCAG TGAAACATGG CTGTATCAGT ATTTCCCGCC AGCGTCGGAT
AAACGTCAGT ATGTTGACGA CCGCGTGATG AGTTAA
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| Protein sequence | MDRRRFIKGS MAMAAVCGTS GIASLFSQAA FAADSDIADG QTQRFDFSIL QSMAHDLAQT
AWRGAPRPLP DTLATMTPQA YNSIQYDAEK SLWHNVENRQ LDAQFFHMGM GFRRRVRMFS
VDPATHLARE IHFRPELFKY NDAGVDTKQL EGQSDLGFAG FRVFKAPELA RRDVVSFLGA
SYFRAVDDTY QYGLSARGLA IDTYTDSKEE FPDFTAFWFD TVKPGATTFT VYALLDSASI
TGAYKFTIHC EKSQVIMDVE NHLYARKDIK QLGIAPMTSM FSCGTNERRM CDTIHPQIHD
SDRLSMWRGN GEWICRPLNN PQKLQFNAYT DNNPKGFGLL QLDRDFSHYQ DIMGWYNKRP
SLWLEPRNKW GKGTIGLMEI PTTGETLDNI VCFWQPEKAV KAGDEFAFQY RLYWSAQPPV
HCPLARVMAT RTGMGGFPEG WAPGEHYPEK WARRFAVDFV GGDLKAAAPK GIEPVITLSS
GEAKQIEILY IEPIDGYRIQ FDWYPTSDST DPVDMRMYLR CQGDAISETW LYQYFPPASD
KRQYVDDRVM S
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