Gene SbBS512_E1555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1555 
Symbol 
ID6272772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1418027 
End bp1419088 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content56% 
IMG OID641725649 
Producthypothetical protein 
Protein accessionYP_001880155 
Protein GI187733878 
COG category[S] Function unknown 
COG ID[COG3768] Predicted membrane protein 
TIGRFAM ID[TIGR01620] conserved hypothetical protein, TIGR01620 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAC CGTTAAAACC ACGTATTGAT TTCGACGGTC CGCTGGAGGT CGATCAGAAT 
CCAAAATTCA GGGCGCAGCA GACCTTTGAC GAAAATCAGG CGCAAAATTT TGCCCCGGCC
ACGCTCGATG AAGCGCCTGA AGAAGAGGGG CAAGTTGAAG CGGTAATGGA TGCAGCGTTA
CGTCCGAAAC GCAGCCTGTG GCGCAAAATG GTGATGGGCG GGCTGGCTCT GTTTGGCGCA
AGCGTTGTCG GGCAGGGTGT ACAGTGGACA ATGAATGCCT GGCAAACTCA GGACTGGGTG
GCGCTGGGTG GATGTGCCGC TGGGGCATTG ATTATCGGCG CTGGCGTAGG TTCTGTGGTA
ACAGAGTGGC GGCGCTTATG GCGCTTGCGA CAGCGCGCCC ATGAACGCGA CGAAGCGCGC
GATTTGTTGC ACAGCCACGG CACGGGCAAA GGCCGCGCAT TTTGCGAAAA ACTGGCGCAG
CAGGCGGGTA TTGATCAGTC TCATCCAGCG CTGCAACGCT GGTATGCCTC AATCCATGAA
ACGCAAAACG ACCGTGAAGT GGTCAGTTTG TATGCGCATT TGGTCCAGCC AGTTTTAGAT
GCCCAGGCGC GGCGCGAAAT CAGCCGTTCG GCGGCGGAAT CAACGTTGAT GATTGCGGTC
AGCCCGCTGG CGTTGGTCGA TATGGCGTTT ATCGCCTGGC GCAATCTGCG TTTAATTAAT
CGCATCGCCA CGCTGTATGG CATTGAACTG GGGTATTACA GCCGTTTGCG TCTGTTTAAG
CTGGTATTGC TGAATATCGC TTTTGCCGGA GCCAGCGAAC TGGTGCGCGA AGTGGGGATG
GACTGGATGT CGCAAGATCT CGCTGCTCGT TTGTCTACCC GCGCAGCTCA GGGAATTGGT
GCTGGACTTC TGACGGCACG ACTCGGGATT AAAGCTATGG AGCTTTGCCG CCCGCTGCCG
TGGATTGACG ATGACAAACC TCGCCTCGGG GATTTCCGTC GTCAGCTTAT CGGTCAGGTG
AAAGAAACGC TGCAAAAAGG CAAAACGCCC AGCGAAAAAT AA
 
Protein sequence
MTEPLKPRID FDGPLEVDQN PKFRAQQTFD ENQAQNFAPA TLDEAPEEEG QVEAVMDAAL 
RPKRSLWRKM VMGGLALFGA SVVGQGVQWT MNAWQTQDWV ALGGCAAGAL IIGAGVGSVV
TEWRRLWRLR QRAHERDEAR DLLHSHGTGK GRAFCEKLAQ QAGIDQSHPA LQRWYASIHE
TQNDREVVSL YAHLVQPVLD AQARREISRS AAESTLMIAV SPLALVDMAF IAWRNLRLIN
RIATLYGIEL GYYSRLRLFK LVLLNIAFAG ASELVREVGM DWMSQDLAAR LSTRAAQGIG
AGLLTARLGI KAMELCRPLP WIDDDKPRLG DFRRQLIGQV KETLQKGKTP SEK