Gene SbBS512_E1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1398 
Symbol 
ID6273123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1277566 
End bp1278024 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content47% 
IMG OID641725503 
Producthypothetical protein 
Protein accessionYP_001880012 
Protein GI187732316 
COG category[S] Function unknown 
COG ID[COG3012] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTCAGC TTTGTCCCTG TGGTAGTGCT GTCGAGTATA GCCTATGTTG CCACCCTTAT 
GTGTCTGGTG AAAAGGTTGC ACCTGATCCA GAACATCTCA TGCGTTCGCG TTACTGCGCT
TTTGTGATGC AAGACGCAGA TTATTTAATA AAGACCTGGC ATCCCTCTTG TGGAGCAGCG
GCGTTACGTG CCGAATTGAT GGCCGGATTT GCGCATACTG AATGGTTGGG ATTGACCGTA
TTTGAACATT GTTGGCAGGA CGCCGACAAT ATCGGATTTG TCAGTTTTGT TGCTCGATTT
ACCGAAGGTG GCAAAACAGG TGCAATAATT GAACGTTCGC GATTTTTGAA AGAAAACGGT
CAATGGTACT ATATTGACGG TACACGTCCG CAGTTTGGTC GCAACGATCC CTGCCCTTGT
GGTTCAGGTA AAAAATTTAA AAAGTGCTGC GGCCAATAA
 
Protein sequence
MSQLCPCGSA VEYSLCCHPY VSGEKVAPDP EHLMRSRYCA FVMQDADYLI KTWHPSCGAA 
ALRAELMAGF AHTEWLGLTV FEHCWQDADN IGFVSFVARF TEGGKTGAII ERSRFLKENG
QWYYIDGTRP QFGRNDPCPC GSGKKFKKCC GQ