Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1335 |
Symbol | |
ID | 6269989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1216052 |
End bp | 1216711 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641725451 |
Product | hypothetical protein |
Protein accession | YP_001879962 |
Protein GI | 187730567 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.00641682 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCAAC ATCACAACTG GCAAGGTGCG CTGCTGGATT ATCCGGTGAG TAAAGTAGTC TGTGTTGGCA GTAACTATGC CAAACATATT AAAGAGATGG GCAGCGCAGT GCCCGAAGAG CCAGTGCTGT TTATTAAACC AGAAACGGCA CTGTGCGATC TGCGGCAGCC ATTGGCGATC CCATCCGATT TCGGTTCAGT TCATCATGAA GTCGAACTGG CGGTGTTGAT TGGTGCGACG CTGCGTCAGG CAACGGAAGA GCATGTCCGC AAAGCCATTG CCGGTTACGG CGTGGCGCTT GATCTGACAT TGCGTGATGT TCAGGGAAAA ATGAAGAAAG CCGGGCAGCC GTGGGAAAAG GCTAAAGCGT TTGATAACTC TTGTCCGCTT TCCGGGTTTA TCCCCGCGGC GGAATTTACC GGCGATCCAC AAAATACAAC GCTGGGCCTG AGCGTAAACG GCGAACAACG CCAGCAAGGT ACGACTGCGG ACATGATCCA TAAAATCGTT CCGTTGATCG CTTATATGAG CAAGTTTTTT ACCCTCAAGG CCGGTGACGT TGTGTTGACA GGCACGCCTG ATGGCGTCGG CCCGTTGCAA AGCGGTGATG AGCTGACAGT CACTTTCGAT GGGCATTCTT TGACAACTCG CGTTTTGTAA
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Protein sequence | MYQHHNWQGA LLDYPVSKVV CVGSNYAKHI KEMGSAVPEE PVLFIKPETA LCDLRQPLAI PSDFGSVHHE VELAVLIGAT LRQATEEHVR KAIAGYGVAL DLTLRDVQGK MKKAGQPWEK AKAFDNSCPL SGFIPAAEFT GDPQNTTLGL SVNGEQRQQG TTADMIHKIV PLIAYMSKFF TLKAGDVVLT GTPDGVGPLQ SGDELTVTFD GHSLTTRVL
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