| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1311 |
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| Symbol | mnmA |
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| ID | 6269365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 1197575 |
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| End bp | 1198681 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641725430 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001879941 |
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| Protein GI | 187730842 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.817312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAA CCGCAAAAAA AGTAATCGTC GGCATGTCCG GCGGTGTCGA TTCCTCCGTT
TCTGCCTGGC TGTTGCAACA ACAGGGATAT CAGGTTGAAG GCCTGTTTAT GAAGAACTGG
GAAGAAGACG ACGGTGAGGA ATATTGCACA GCGGCAGCGG ATCTGGCTGA TGCCCAGGCT
GTCTGCGACA AGCTCGGCAT TGAACTGCAC ACCGTTAACT TTGCTGCCGA GTACTGGAAC
AACGTCTTCG AACTGTTCCT TGCCGAATAT AAAGCCGGTC GCACGCCGAA TCCGGATATT
CTGTGCAACA AAGAGATCAA ATTTAAAGCT TTCCTCGAAT TTGCCGCCGA AGATTTAGGT
GCCGATTATA TCGCTACCGG TCATTACGTA CGTCGGGCCG ATGTCGATGG CAAGAGCCGC
CTGCTGCGTG GTCTGGACAG CAATAAAGAC CAGAGCTACT TCCTTTATAC GCTCAGCCAT
GAGCAGATTG CGCAAAGCCT GTTCCCGGTC GGCGAACTGG AAAAACCGCA GGTGCGTAAG
ATTGCTGAAG ATCTTGGTCT GGTCACCGCG AAGAAAAAAG ACTCTACCGG CATTTGCTTC
ATTGGCGAAC GTAAATTCCG CGAGTTCCTG GGCCGTTATC TCCCGGCGCA ACCGGGCAAA
ATCATTACCG TCGATGGCGA TGAAATTGGT GAGCACCAGG GGCTGATGTA TCACACTCTC
GGTCAGCGTA AAGGTCTGGG TATCGGTGGC ACCAAAGAAG GCACCGAAGA ACCGTGGTAT
GTGGTGGACA AAGACGTCGA AAACAACATT CTGGTTGTTG CGCAGGGCCA TGAACACCCG
CGGCTGATGT CTGTCGGGTT GATTGCCCAG CAGTTGCACT GGGTCGATCG CGAACCATTC
ACCGGTACTA TGCGTTGCAC GGTAAAAACC CGCTATCGCC AGACCGATAT CCCTTGCACC
GTCAAGGCGC TGGACGATGA TCGCATTGAA GTGATTTTCG ATGAACCGGT TGCCGCCGTG
ACGCCGGGCC AGTCTGCCGT CTTCTATAAC GGTGAAGTGT GCCTCGGTGG CGGTATTATT
GAGCAGCGTC TGCCGCTGCC GGTCTGA
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| Protein sequence | MSETAKKVIV GMSGGVDSSV SAWLLQQQGY QVEGLFMKNW EEDDGEEYCT AAADLADAQA
VCDKLGIELH TVNFAAEYWN NVFELFLAEY KAGRTPNPDI LCNKEIKFKA FLEFAAEDLG
ADYIATGHYV RRADVDGKSR LLRGLDSNKD QSYFLYTLSH EQIAQSLFPV GELEKPQVRK
IAEDLGLVTA KKKDSTGICF IGERKFREFL GRYLPAQPGK IITVDGDEIG EHQGLMYHTL
GQRKGLGIGG TKEGTEEPWY VVDKDVENNI LVVAQGHEHP RLMSVGLIAQ QLHWVDREPF
TGTMRCTVKT RYRQTDIPCT VKALDDDRIE VIFDEPVAAV TPGQSAVFYN GEVCLGGGII
EQRLPLPV
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