Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E1218 |
Symbol | yeeF |
ID | 6271718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 1124411 |
End bp | 1125769 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641725349 |
Product | amino acid permease |
Protein accession | YP_001879863 |
Protein GI | 187733132 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCATA ACGTTACTCC AAACACCTCT CGCGTGGAAT TGCGTAAAAC GCTTACGTTA GTTCCGGTTG TAATGATGGG TCTTGCCTAT ATGCAGCCGA TGACGCTGTT TGATACTTTT GGTATCGTTT CAGGCCTCAC GGATGGTCAT GTGCCGACAG CCTATGCGTT CGCATTGATT GCGATCCTGT TTACGGCTCT GAGCTACGGG AAGCTGGTTC GCCGCTATCC TTCTGCTGGC TCTGCATACA CTTACGCCCA GAAATCCATT AGCCCGACTG TCGGCTTTAT GGTGGGTTGG TCTTCTCTGC TCGACTATCT GTTCGCGCCG ATGATCAACA TTCTGCTGGC GAAAATTTAT TTTGAAGCTC TGGTGCCTTC CATCCCATCG TGGATGTTTG TGGTGGCGCT GGTGGCCTTT ATGACCGCCT TTAACCTGCG TAGTCTGAAA TCCGTAGCGA ACTTCAACAC TGTAATCGTC GTGTTGCAGG TAGTGCTGAT CGCGGTGATT CTGGGCATGG TTGTTTATGG CGTATTTGAA GGTGAAGGCG CTGGTACGCT GGCGAGCACT CGTCCGTTCT GGTCTGGCGA TGCGCATGTT ATCCCGATGA TTACCGGGGC GACAATCCTG TGCTTCTCCT TTACCGGCTT TGACGGCATC AGCAACCTGT CGGAAGAAAC CAAAGATGCA GAGCGCGTGA TCCCGCGTGC GATTTTCCTG ACCGCGCTGA TTGGCGGCAT GATCTTCATC TTTGCAACTT ACTTCCTGCA GCTGTACTTC CCGGATATCT CTCGCTTTAA AGATCCGGAT GCGTCACAGC CTGAAATCAT GCTGTACGTG GCAGGTAAAG CATTCCAGGT TGGTGCGCTG ATCTTCTCCA CCATTACCGT ACTGGCGTCC GGTATGGCGG CGCACGCAGG TGTTGCGCGT CTGATGTACG TAATGGGGCG TGACGGCGTA TTCCCGAAAA GCTTCTTCGG TTATGTACAC CCGAAATGGC GTACTCCGGC GATGAACATC ATCCTGGTTG GCGCGATTGC CCTGCTGGCA ATCAACTTCG ACCTGGTAAT GGCTACGGCG CTGATTAACT TTGGTGCGTT GGTGGCGTTC ACCTTCGTTA ACCTGTCGGT TATCTCGCAG TTCTGGATCC GTGAGAAGCG TAACAAGACG CTGAAAGATC ACTTCCAGTA TCTGTTCCTG CCGATGTGTG GTGCGCTGAC CGTTGGTGCG CTGTGGGTTA ACCTGGAAGA AAGCTCAATG GTTCTGGGTC TGATCTGGGC GGCTATCGGT CTGATTTACC TGGCTTGCGT CACCAAGAGC TTCCGTAACC CGGTTCCGCA GTACGAAGAC GTTGCATAA
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Protein sequence | MSHNVTPNTS RVELRKTLTL VPVVMMGLAY MQPMTLFDTF GIVSGLTDGH VPTAYAFALI AILFTALSYG KLVRRYPSAG SAYTYAQKSI SPTVGFMVGW SSLLDYLFAP MINILLAKIY FEALVPSIPS WMFVVALVAF MTAFNLRSLK SVANFNTVIV VLQVVLIAVI LGMVVYGVFE GEGAGTLAST RPFWSGDAHV IPMITGATIL CFSFTGFDGI SNLSEETKDA ERVIPRAIFL TALIGGMIFI FATYFLQLYF PDISRFKDPD ASQPEIMLYV AGKAFQVGAL IFSTITVLAS GMAAHAGVAR LMYVMGRDGV FPKSFFGYVH PKWRTPAMNI ILVGAIALLA INFDLVMATA LINFGALVAF TFVNLSVISQ FWIREKRNKT LKDHFQYLFL PMCGALTVGA LWVNLEESSM VLGLIWAAIG LIYLACVTKS FRNPVPQYED VA
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