| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1179 |
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| Symbol | gmd |
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| ID | 6272532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 1081860 |
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| End bp | 1082981 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641725311 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_001879825 |
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| Protein GI | 187732879 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAG TCGCTCTCAT CACCGGTGTA ACCGGACAAG ACGGTTCTTA CCTGGCAGAG
TTTCTGCTGG AAAAAGGTTA CGAGGTGCAT GGTATTAAGC GTCGCGCATC GTCATTCAAC
ACCGAGCGCG TGGATCACAT TTATCAGGAT CCGCACACCT GCAACCCGAA ATTCCATCTG
CATTATGGCG ACCTGAGTGA TACCTCTAAC CTGACGCGCA TTTTGCGTGA AGTACAGCCG
GATGAAGTGT ACAACCTGGG CGCAATGAGC CACGTTGCGG TCTCTTTTGA GTCACCAGAA
TATACCGCTG ACGTCGACGC GATGGGTACG CTGCGCCTGC TGGAGGCGAT CCGCTTCCTC
GGTCTGGAAA AGAAAACTCG TTTCTATCAG GCTTCCACCT CTGAACTGTA TGGTCTGGTG
CAGGAAATTC CGCAGAAAGA GACCACGCCG TTCTACCCGC GATCTCCGTA TGCGGTCGCC
AAACTGTACG CCTACTGGAT CACCGTTAAC TACCGTGAAT CCTACGGCAT GTACGCCTGT
AACGGAATTC TCTTCAACCA TGAATCCCCG CGCCGCGGCG AAACCTTCGT TACCCGCAAA
ATCACCCGCG CAATCGCCAA CATCGCCCAG GGGCTGGAGT CGTGCCTGTA CCTCGGCAAT
ATGGATTCCC TGCGTGACTG GGGCCACGCC AAAGACTACG TAAAAATGCA GTGGATGATG
CTGCAGCAGG AACAGCCGGA AGATTTCGTT ATCGCGACCG GCGTTCAGTA CTCCGTGCGT
CAGTTCGTGG AAATGGCGGC AGCACAGCTG GGCATCAAAC TGCGCTTTGA AGGCACGGGT
GTTGAAGAGA AGGGCATTGT GGTTTCCGTC ACCGGGCATG ACGCGCCGGG CGTTAAACCG
GGTGATGTGA TTATCGCCGT TGACCCGCGT TACTTCCGTC CGGCAGAAGT TGAAACGCTG
CTCGGCGACC CGACCAAAGC GCACGAAAAA CTGGGCTGGA AACCGGAAAT CACCCTCAGA
GAGATGGTGT CTGAAATGGT GGCTAATGAC CTCGAAGCGG CGAAAAAACA CTCTCTGCTG
AAATCTCACG GCTACGACGT GGCGATCGCG CTGGAGTCAT AA
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| Protein sequence | MSKVALITGV TGQDGSYLAE FLLEKGYEVH GIKRRASSFN TERVDHIYQD PHTCNPKFHL
HYGDLSDTSN LTRILREVQP DEVYNLGAMS HVAVSFESPE YTADVDAMGT LRLLEAIRFL
GLEKKTRFYQ ASTSELYGLV QEIPQKETTP FYPRSPYAVA KLYAYWITVN YRESYGMYAC
NGILFNHESP RRGETFVTRK ITRAIANIAQ GLESCLYLGN MDSLRDWGHA KDYVKMQWMM
LQQEQPEDFV IATGVQYSVR QFVEMAAAQL GIKLRFEGTG VEEKGIVVSV TGHDAPGVKP
GDVIIAVDPR YFRPAEVETL LGDPTKAHEK LGWKPEITLR EMVSEMVAND LEAAKKHSLL
KSHGYDVAIA LES
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