Gene SbBS512_E1144 details

Gene Information

• Locus tag: SbBS512_E1144
• Symbol: gatA
• ID: 6272043
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 1036560
• End bp: 1037012
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 641725273
• Product: PTS system galactitol-specific transporter subunit IIA
• Protein accession: YP_001879791
• Protein GI: 187732330
• COG category: [G] Carbohydrate transport and metabolism; [T] Signal transduction mechanisms
• COG ID: [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type)

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 0.199908
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTAACC TGTTTGTTCG TAGCGGAATT TCTTTTGTCG ATCGTAGCGA AGTTTTAACC 
CATATCGGTA ATGAGATGCT CGCCAAAGGT GTGGTTCATG ATACCAGGCC ACAGGCATTA 
ATTGCCAGAG AAGCAGAATT CCCTACCGGG ATAATGCTTG AGCAGCACGC CATTGCAATA 
CCGCATTGTG AGGCGATTCA TGCTAAGTCG TCAGCCATTT ATCTGTTAAG GCCAACAAAT 
AAAGTTCATT TTCAGCAAGC GGATGATGAT AACGACGTGG AGGTATCGTT GGTTATTGCG 
TTGATTGTGG AAAATCCGCA GCAGCAATTG AAACTTTTAC GCTGTTTATT TGGCAAGTTA 
CAACAGCCCG ATATCGTCGA GACACTAATC ACTCTTCCTG AAACCCAGTT AAAGGAATAC 
TTCACAAAGT ATGTTTTAGA TTCAGACGAA TAA 

 

Protein sequence

MTNLFVRSGI SFVDRSEVLT HIGNEMLAKG VVHDTRPQAL IAREAEFPTG IMLEQHAIAI 
PHCEAIHAKS SAIYLLRPTN KVHFQQADDD NDVEVSLVIA LIVENPQQQL KLLRCLFGKL 
QQPDIVETLI TLPETQLKEY FTKYVLDSDE