| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E1034 |
|---|
| Symbol | tyrP |
|---|
| ID | 6272289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 951951 |
|---|
| End bp | 953162 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641725176 |
|---|
| Product | tyrosine-specific transport protein |
|---|
| Protein accession | YP_001879698 |
|---|
| Protein GI | 187734006 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0814] Amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000000311327 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAACA GAACTCTGGG AAGTGTTTTT ATCGTGGCGG GAACCACAAT TGGCGCAGGC
ATGCTGGCAA TGCCGCTGGC TGCGGCAGGT GTTGGTTTTA GCGTCACGTT AATCTTGTTG
ATTGGGCTTT GGGCGTTGAT GTGCTACACG GCGCTATTAC TGCTGGAGGT GTACCAGCAT
GTTCCGGCAG ATACCGGTCT GGGCACGCTG GCAAAACGCT ATCTGGGACG CTACGGTCAA
TGGCTGACGG GCTTCAGTAT GATGTTCTTA ATGTATGCTC TGACTGCGGC ATACATCAGC
GGTGCCGGTG AATTGTTGGC CTCCAGCATC AGCGACTGGA CAGGTATTTC AATGTCGGCA
ACCGCTGGCG TGCTGTTGTT CACTTTTGTT GCCGGTGGCG TGGTTTGTGT TGGAACATCG
CTGGTCGATT TATTTAACCG TTTTCTGTTC AGCGCCAAAA TTATTTTTCT GGTGGTGATG
CTGGTATTGC TGCTACCGCA TATTCACAAA GTGAATCTTT TAACCCTGCC GTTGCAACAG
GGGCTGGCTC TGTCAGCAAT CCCGGTGATT TTTACCTCAT TTGGTTTTCA CGGTAGCGTG
CCGAGTATTG TCAGCTATAT GGATGGCAAC GTTCGTAAGC TACGCAGGGT GTTTATAACC
GGTAGTGCGA TCCCCCTGGT GGCATATATT TTCTGGCAGG TGGCAACGCT TGGCAGCATT
GATTCAACAA CCTTTATGGG ATTGCTGGCT AATCATGCTG GATTAAACGG GCTGTTACAG
GCGTTACGCG AAATGGTGGC CTCTCCGCAT GTTGAGCTGG CAGTGCATTT ATTTGCTGAT
TTAGCCCTCG CCACGTCATT TCTCGGCGTT GCGTTAGGCT TATTTGATTA TCTGGCTGAT
TTATTTCAGC GTTCAAATAC CGTTGGTGGA CGGTTGCAAA CTGGTGCAAT TACCTTTCTG
CCGCCGTTGG CGTTTGCACT GTTTTATCCA CGAGGATTTG TGATGGCGCT GGGTTACGCC
GGTGTGGCGC TGGCGGTACT GGCATTGATT ATCCCTTCGC TGTTGACCTG GCAAAGCAGA
AAGCACAATC CTCAGGCGGG TTACCGGGTC AAAGGTGGTC GTCCGGCGCT GGTGGTGGTG
TTTCTCTGTG GTATTGCTGT GATTGGCGTG CAATTTTTGA TTGCGGCAGG GTTGTTACCA
GAAGTGGGGT GA
|
|---|
| Protein sequence | MKNRTLGSVF IVAGTTIGAG MLAMPLAAAG VGFSVTLILL IGLWALMCYT ALLLLEVYQH
VPADTGLGTL AKRYLGRYGQ WLTGFSMMFL MYALTAAYIS GAGELLASSI SDWTGISMSA
TAGVLLFTFV AGGVVCVGTS LVDLFNRFLF SAKIIFLVVM LVLLLPHIHK VNLLTLPLQQ
GLALSAIPVI FTSFGFHGSV PSIVSYMDGN VRKLRRVFIT GSAIPLVAYI FWQVATLGSI
DSTTFMGLLA NHAGLNGLLQ ALREMVASPH VELAVHLFAD LALATSFLGV ALGLFDYLAD
LFQRSNTVGG RLQTGAITFL PPLAFALFYP RGFVMALGYA GVALAVLALI IPSLLTWQSR
KHNPQAGYRV KGGRPALVVV FLCGIAVIGV QFLIAAGLLP EVG
|
|---|
| |