Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0850 |
Symbol | |
ID | 6271750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 798645 |
End bp | 799163 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641725021 |
Product | hypothetical protein |
Protein accession | YP_001879548 |
Protein GI | 187732655 |
COG category | [S] Function unknown |
COG ID | [COG5455] Predicted integral membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.947239 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTCTTA AATCAGCTAT TTCCGCTGAC TCTCTGCTCG CTAAGGATGC TTTTAGGGCA TCCTTTCATT TACACTTTTT ACGAAATCAT GGGATCACTA ACAAAATATC GCTTGTCAGT TATATTGTAT GGCAGGAAAG ATATGCGACT GATATTACAG ATCCCCAAAG TGGAGAGTTT ATGACCATTA AAAATAAGAT GTTGCTGGGT GCGCTTTTGC TGGTTACCAG TGCCGCCTGG GCCGCACCAG CCACCGCGGG TTCGACCAAT ACCTCGGGAA TTTCTAAGTA TGAGTTAAGC AGTTTCATTG CTGACTTTAA GCATTTCAAA CCAGGCGATA CCGTCCCAGA GATGTACCGC ACCGATGAGT ACAACATTAA GCAGTGGCAG TTACGTAACC TGCCCGCGCC TGATGCCGGG ACGCACTGGA CCTATATGGG TGGCGCGTAC GTGTTGATCA GCGACACCGA CGGTAAAATC ATTAAAGCCT ACGACGGTGA GATTTTTTAT CATCGCTAA
|
Protein sequence | MILKSAISAD SLLAKDAFRA SFHLHFLRNH GITNKISLVS YIVWQERYAT DITDPQSGEF MTIKNKMLLG ALLLVTSAAW AAPATAGSTN TSGISKYELS SFIADFKHFK PGDTVPEMYR TDEYNIKQWQ LRNLPAPDAG THWTYMGGAY VLISDTDGKI IKAYDGEIFY HR
|
| |