Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0807 |
Symbol | nfo |
ID | 6270337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 756410 |
End bp | 757267 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641724983 |
Product | endonuclease IV |
Protein accession | YP_001879510 |
Protein GI | 187730213 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATACA TTGGAGCGCA CGTTAGTGCT GCTGGCGGTC TGGCAAATGC CGCAATTCGC GCCGCCGAAA TCGACGCAAC CGCGTTTGCC TTGTTCACCA AAAACCAACG TCAGTGGCGT GCCGCACCGC TCACGACGCA AACCATCGAT GAATTCAAAG CGGCCTGTGA AAAATATCAC TACACATCGG CGCAAATTCT TCCCCACGAC AGCTATCTGA TTAACCTCGG ACATCCGGTC ACTGAAGCTC TGGAAAAATC GCGCGATGCC TTTATAGATG AAATGCAGCG TTGCGAACAA CTGGGGCTTT CTTTGCTCAA CTTCCACCCT GGCAGCCATC TGATGCAGAT TTCAGAAGAG GATTGCCTTG CGCGTATTGC CGAATCCATC AACATTGCGC TGGATAAAAC TCAAGGTGTA ACAGCGGTGA TTGAAAACAC CGCCGGTCAG GGCAGTAACT TAGGGTTTAA ATTCGAACAT CTCGCGGCGA TTATCGACGG CGTGGAAGAT AAATCCCGTG TCGGCGTCTG CATTGATACC TGCCATGCTT TCGCTGCCGG GTATGATTTG CGTACTCCAG CCGAATGCGA GAAAACGTTC GCGGATTTTG CCCGTATTGT TGGCTTTAAG TATCTGCGCG GGATGCACCT TAACGATGCG AAAAGCACCT TTGGCAGCCG CGTTGACCGC CATCATAGCC TCGGTGAAGA CAATATCGGT CATGATGCGT TCCGCTGGAT CATGCAGGAC GACCGTTTCG ACGGCATTCC GCTGATCCTT GAAACCATCA ACCCGGATAT CTGGGCAGAA GAGATCGCCT GGCTGAAAGC GCAACAAACT GAAAAAGCGG TAGCCTGA
|
Protein sequence | MKYIGAHVSA AGGLANAAIR AAEIDATAFA LFTKNQRQWR AAPLTTQTID EFKAACEKYH YTSAQILPHD SYLINLGHPV TEALEKSRDA FIDEMQRCEQ LGLSLLNFHP GSHLMQISEE DCLARIAESI NIALDKTQGV TAVIENTAGQ GSNLGFKFEH LAAIIDGVED KSRVGVCIDT CHAFAAGYDL RTPAECEKTF ADFARIVGFK YLRGMHLNDA KSTFGSRVDR HHSLGEDNIG HDAFRWIMQD DRFDGIPLIL ETINPDIWAE EIAWLKAQQT EKAVA
|
| |