Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0743 |
Symbol | ccmD |
ID | 6272393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 700570 |
End bp | 700779 |
Gene Length | 210 bp |
Protein Length | 69 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641724929 |
Product | heme exporter protein D |
Protein accession | YP_001879457 |
Protein GI | 187733911 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3114] Heme exporter protein D |
TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.168923 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCTG CATTTGCTTC CTGGAATGAA TTTTTCGCAA TGGGCGGTTA CGCCTTTTTT GTCTGGCTGG CGGTGGTGAT GACCGTTATT CCGCTGGTGG TTTTGGTCGT GCACTCGGTG ATGCAGCATC GCGCAATTCT GTGTGGTGTG GAGCAACAGC GGGCGCGTGA GGCGCGTTTA CGTGCTGCGC AACAGCAGGA GGCTGCATGA
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Protein sequence | MTPAFASWNE FFAMGGYAFF VWLAVVMTVI PLVVLVVHSV MQHRAILCGV EQQRAREARL RAAQQQEAA
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