| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0737 |
|---|
| Symbol | napH |
|---|
| ID | 6269560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 696578 |
|---|
| End bp | 697441 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641724923 |
|---|
| Product | quinol dehydrogenase membrane component |
|---|
| Protein accession | YP_001879451 |
|---|
| Protein GI | 187734091 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0348] Polyferredoxin |
|---|
| TIGRFAM ID | [TIGR02163] ferredoxin-type protein, NapH/MauN family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATC GTAAACGTGA CGCCGGGCGC GAGGCGCTGG AGAAAAAAGG CTGGTGGCGC
AGTCACCGTT GGCTGGTGTT ACGTCGCCTT TGTCAGTTCT TCGTGCTGGG GATGTTTTTG
AGCGGTCCGT GGTTTGGTGT GTGGATCTTA CACGGTAACT ACAGCAGTAG CCTGTTATTC
GACACCGTTC CGCTGACCGA TCCGCTGATG ACGCTGCAAA GTCTTGCCAG CGGTCATCTG
CCTGCCACGG TGGCGTTGAC CGGTGCGGTG ATTATCACCG TGCTCTACGC CCTGGCAGGA
AAGCGATTAT TTTGCAGCTG GGTCTGCCCG CTGAATCCGA TTACCGACTT AGCGAACTGG
TTACGCAGGC GCTTTGACCT CAATCAGTCT GCGACGATCC CTCGCCACAT TCGCTACGTG
CTGTTGGTGG TCATTCTGCT GGGATCGGCC TTAACTGGCA CGCTCATCTG GGAATGGATC
AACCCCGTAT CTCTGATGGG GCGCAGCCTG GTAATGGGCT TCGGCAGCGG CGCGCTGCTT
ATTCTCGCGC TGTTTTTATT TGATCTACTG GTCGTTGAAC ACGGCTGGTG CGGGCACATT
TGTCCGGTTG GCGCGCTGTA TGGCGTGCTG GGTAGCAAAG GTGTGATTAC CGTTGCGGCC
ACCGATCGGC AGAAATGTAA CCGCTGTATG GATTGTTTTC ATGTTTGCCC GGAACCGCGT
GTGCTACGTG CCCCGGTGCT GGATGAACAA AGCCCGGTGC AGGTCACCAG CCGCGATTGC
ATGACGTGCG GTCGCTGCGT GGATGTCTGT TCTGAGGATG TATTTACAAT AACTACACGA
TGGAGTTCGG GAGCGAAATC ATGA
|
|---|
| Protein sequence | MANRKRDAGR EALEKKGWWR SHRWLVLRRL CQFFVLGMFL SGPWFGVWIL HGNYSSSLLF
DTVPLTDPLM TLQSLASGHL PATVALTGAV IITVLYALAG KRLFCSWVCP LNPITDLANW
LRRRFDLNQS ATIPRHIRYV LLVVILLGSA LTGTLIWEWI NPVSLMGRSL VMGFGSGALL
ILALFLFDLL VVEHGWCGHI CPVGALYGVL GSKGVITVAA TDRQKCNRCM DCFHVCPEPR
VLRAPVLDEQ SPVQVTSRDC MTCGRCVDVC SEDVFTITTR WSSGAKS
|
|---|
| |