Gene SbBS512_E0663 details

Gene Information

• Locus tag: SbBS512_E0663
• Symbol: pal
• ID: 6273311
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 633844
• End bp: 634365
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641724859
• Product: peptidoglycan-associated outer membrane lipoprotein
• Protein accession: YP_001879398
• Protein GI: 187731438
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
• TIGRFAM ID: [TIGR02802] peptidoglycan-associated lipoprotein

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000000000000160388
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACTGA ACAAAGTGCT GAAAGGGCTG ATGATTGCTC TGCCTGTTAT GGCAATTGCG 
GCATGTTCTT CCAACAAGAA CGCCAGCAAT GACGGCAGCG AAGGCATGCT GGGTGCCGGC 
ACTGGTATGG ATGCGAACGG CGGCAACGGC AACATGTCTT CCGAAGAGCA GGCTCGTCTG 
CAAATGCAAC AGCTGCAGCA GAACAACATC GTTTACTTCG ATCTGGACAA GTACGATATC 
CGTTCTGACT TCGCTCAAAT GCTGGATGCA CATGCAAACT TCCTGCGTAG CAACCCGTCT 
TACAAAGTCA CCGTAGAAGG TCACGCGGAC GAACGTGGTA CTCCGGAATA CAACATCTCC 
CTGGGTGAAC GTCGTGCGAA CGCCGTTAAG ATGTACCTGC AGGGTAAAGG CGTTTCTGCA 
GACCAGATCT CCATCGTTTC TTACGGTAAA GAAAAACCTG CAGTACTGGG TCATGACGAA 
GCGGCATACT CCAAAAACCG TCGTGCGGTA CTGGTTTACT AA 

 

Protein sequence

MQLNKVLKGL MIALPVMAIA ACSSNKNASN DGSEGMLGAG TGMDANGGNG NMSSEEQARL 
QMQQLQQNNI VYFDLDKYDI RSDFAQMLDA HANFLRSNPS YKVTVEGHAD ERGTPEYNIS 
LGERRANAVK MYLQGKGVSA DQISIVSYGK EKPAVLGHDE AAYSKNRRAV LVY