Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0650 |
Symbol | |
ID | 6268834 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 621448 |
End bp | 623364 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641724847 |
Product | PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC |
Protein accession | YP_001879386 |
Protein GI | 187732566 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component [COG1445] Phosphotransferase system fructose-specific component IIB [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component [TIGR00848] PTS system, fructose subfamily, IIA component [TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTGA CGACTCTGAC CCACCGCGAT GCGTTGCGTC TGAATGCGCG CTTTACCAGC CGTGAAGAGG CCATCCACGC GTTGACTCAA CGTCTTGCTG CTCTGGGGAA AATTTCCAGT ACTGAGCAAT TTCTGGAAGA AGTGTATCGC CGTGAAAGCC TTGGCCCGAC CGCCTTAGGT GAAGGGTTGG CTGTGCCGCA TGGCAAAACT GCTGCGGTAA AAGAAGCGGC GTTTGCGGTC GCCACACTCA GCGAGCCGCT TCAGTGGGAA GGCGTTGATG GCCCGGAAGC AGTTGATTTA GTGGTGCTGC TGGCGATTCC CCCCAATGAA GCGGGTACTA TGCATATGCA ACTGCTGACA GCGCTGACCA CGCGCCTTGC GGATGATGAG ATTCGGGCGC GTATACAGTC GGCGACGACG CCTGATGAGT TGCTCTCGGC GCTGGATGAC AAGGGAGGCA CGCAACCTTC TGCCTCTTTT TCCAACGCGC CAACTATCGT CTGCGTAACG GCCTGTCCGG CGGGTATTGC TCACACCTAT ATGGCTGCGG AATATCTGGA AAAAGCCGGA CGCAAACTCG GCGTAAATGT TTACGTTGAA AAACAAGGCG CTAACGGCAT TGAAGGGCGT TTAACGGCGG ATCAACTCAA TAGTGCAACC GCCTGTATTT TTGCGGCTGA AGTCGCCATC AAGGAGAGTG AGCGTTTTAA TGGCATTCCC GCGCTTTCAG TGCCTGTTGC CGAGCCGATT CGCCATGCAG AAGCGTTGAT CCAACAAGCG CTTACCCTCA AGCGTAGCGA TGAGACGCGT ACCGTACAGC AAGATACGCA ACCGGTGAAA AGTGTCAAAA CGGAGCTGAA ACAGGCACTG TTGAGCGGAA TCTCTTTTGC CGTACCGTTG ATTGTCGCGG GGGGCACGGT GCTGGCGGTC GCGGTATTAC TGTCGCAAAT CTTCGGGCTA CAAGATCTGT TTAATGAAGA AAACTCCTGG CTGTGGATGT ACCGCAAGCT GGGCGGCGGG CTGCTCGGAA TTTTGATGGT ACCGGTGCTC GCGGCCTATA CCGCCTATTC TCTGGCAGAT AAACCGGCGT TAGCGCCAGG CTTTGCGGCT GGACTTGCCG CCAACATGAT CGGCTCCGGG TTTCTCGGCG CGGTTGTTGG CGGATTGATA GCCGGTTACT TGATGCGCTG GGTGAAAAAT CACTTGCGTC TTAGCAGTAA ATTCAATGGA TTCCTGACTT TTTATCTCTA CCCGGTGCTC GGTACGTTGG GAGCGGGCAG TCTGATGCTG TTTGTGGTGG GAGAACCTGT CGCATGGATC AATAACTCGC TTACCGCCTG GCTGAACGGT CTGTCAGGAA GTAACGCGCT GTTGCTGGGT GCCATTTTCG GTTTTATGTG TTCCTTTGAC CTTGGAGGGC CAGTGAACAA AGCCGCTTAT GCATTCTGCC TGGGCGCAAT GGCGAACGGC GTTTACGGCC CGTATGCCAT TTTCGCCTCC GTCAAAATGG TTTCGGCATT TACCGTAACC GCTTCCACGA TGCTCGCACC GCGCCTGTTT AAAGAGTTTG AAATTGAGAC CGGGAAATCC ACCTGGCTGT TAGGGCTGGC AGGTATTACC GAAGGGGCGA TCCCGATGGC GATTGAAGAT CCGCTGCGGG TTATTGGTTC GTTTGTGCTG GGCTCTATGG TAACGGGCGC TATTGTCGGT GCGATGAATA TCGGCCTTTC GACACCCGGT GCCGGCATTT TCTCGCTCTT TTTACTTCAT GATAATGGCG CGGGCGGTGT TATGGCGGCA ATTGGCTGGT TTGGTGCGGC ATTGGTGGGG GCTGCAATCT CGACTGCAAT TCTCCTGATC TGGCGGCGTC ACGCGGTTAA GCATGGCAAC TATCTGACTG ATGGCGTAAT GCCATAA
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Protein sequence | MNLTTLTHRD ALRLNARFTS REEAIHALTQ RLAALGKISS TEQFLEEVYR RESLGPTALG EGLAVPHGKT AAVKEAAFAV ATLSEPLQWE GVDGPEAVDL VVLLAIPPNE AGTMHMQLLT ALTTRLADDE IRARIQSATT PDELLSALDD KGGTQPSASF SNAPTIVCVT ACPAGIAHTY MAAEYLEKAG RKLGVNVYVE KQGANGIEGR LTADQLNSAT ACIFAAEVAI KESERFNGIP ALSVPVAEPI RHAEALIQQA LTLKRSDETR TVQQDTQPVK SVKTELKQAL LSGISFAVPL IVAGGTVLAV AVLLSQIFGL QDLFNEENSW LWMYRKLGGG LLGILMVPVL AAYTAYSLAD KPALAPGFAA GLAANMIGSG FLGAVVGGLI AGYLMRWVKN HLRLSSKFNG FLTFYLYPVL GTLGAGSLML FVVGEPVAWI NNSLTAWLNG LSGSNALLLG AIFGFMCSFD LGGPVNKAAY AFCLGAMANG VYGPYAIFAS VKMVSAFTVT ASTMLAPRLF KEFEIETGKS TWLLGLAGIT EGAIPMAIED PLRVIGSFVL GSMVTGAIVG AMNIGLSTPG AGIFSLFLLH DNGAGGVMAA IGWFGAALVG AAISTAILLI WRRHAVKHGN YLTDGVMP
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