| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0642 |
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| Symbol | sdhA |
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| ID | 6269501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 611310 |
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| End bp | 613076 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641724839 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001879378 |
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| Protein GI | 187734213 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.928685 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGC CAGTCAGAGA ATTTGATGCA GTTGTGATTG GTGCCGGTGG CGCAGGTATG
CGCGCGGCGC TGCAAATTTC CCAGAGCGGC CAGACCTGTG CGCTGCTCTC TAAAGTCTTC
CCGACCCGTT CCCATACCGT TTCTGCGCAA GGCGGCATTA CCGTTGCGCT GGGTAATACC
CATGAAGATA ACTGGGAATG GCATATGTAC GACACCGTAA AAGGGTCGGA CTATATCGGT
GACCAGGACG CGATTGAATA TATGTGTAAA ACCGGGCCGG AAGCGATTCT GGAACTCGAA
CACATGGGCC TGCCGTTCTC GCGTCTTGAT GATGGTCGTA TCTATCAACG TCCGTTTGGC
GGTCAGTCGA AAAACTTCGG CGGCGAGCAG GCGGCACGCA CTGCGGCGGC GGCTGACCGT
ACCGGTCACG CACTGTTGCA CACGCTTTAT CAGCAGAACC TGAAAAACCA CACCACCATT
TTCTCCGAGT GGTATGCGCT GGATCTGGTG AAGAACCAGG ATGGCGCGGT GGTGGGTTGT
ACTGCACTGA GCATCGAAAC TGGTGAAGTG GTTTATTTCA AAGCCCGCGC TACCGTGCTG
GCGACTGGCG GGGCAGGGCG TATTTATCAG TCCACCACTA ACGCCCACAT TAACACTGGC
GACGGCGTCG GCATGGCTAT CCGCGCAGGC GTACCGGTGC AGGATATGGA AATGTGGCAG
TTCCACCCGA CCGGTATTGC CGGTGCGGGC GTACTGGTCA CCGAAGGTTG CCGTGGTGAA
GGCGGTTATC TGCTGAACAA ACATGGCGAA CGCTTTATGG AGCGTTATGC GCCGAACGCC
AAAGACCTGG CGGGCCGTGA TGTGGTGGCG CGTTCCATCA TGATCGAAAT CCGTGAAGGT
CGCGGCTGTG ATGGTCCGTG GGGGCCACAC GCGAAACTGA AACTCGACCA CCTGGGTAAA
GAAGTTCTCG AATCCCGTCT GCCGGGCATC CTGGAACTCT CCCGTACCTT CGCTCACGTC
GATCCGGTGA AAGAGCCGAT CCCGGTTATC CCAACCTGTC ATTACATGAT GGGCGGTATT
CCGACCAAAG TGACCGGTCA GGCGCTGACT GTGAATGAGA AAGGCGAAGA TGTGGTTGTT
CCGGGACTGT TTGCCGTTGG TGAAATCGCT TGTGTATCGG TACACGGCGC TAACCGTCTG
GGCGGCAACT CGCTGCTGGA CCTGGTGGTC TTTGGTCGTG CGGCAGGTCT GCATCTGCAA
GAGTCTATCG CCGAGCAGGG CGCATTGCGC GATGCCAGCG AGTCTGATGT TGAAGCATCT
CTGGATCGTC TGAACCGCTG GAACAATAAT CGTAATGGTG AAGATCCGGT GGCGATTCGT
AAAGCGCTGC AAGAATGTAT GCAGCATAAC TTCTCGGTCT TCCGTGAAGG TGATGCGATG
GCGAAAGGGC TTGAGCAGTT GAAAGTTATC CGCGAGCGTC TGAAAAATGC CCGTCTGGAT
GACACTTCCA GCGAGTTCAA CACCCAGCGC GTTGAGTGCC TGGAACTGGA TAACCTGATG
GAAACGGCGT ATGCAACGGC TGTTTCTGCC AACTTCCGTA CCGAAAGCCG TGGCGCGCAT
AGCCGCTTCG ACTTCCCGGA TCGTGATGAT GAAAACTGGC TGTGCCACTC CCTGTATCTG
CCAGAGTCGG AATCCATGAC GCGCCGAAGC GTCAACATGG AACCGAAACT GCGCCCGGCA
TTCCCGCCGA AGATTCGTAC TTACTAA
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| Protein sequence | MKLPVREFDA VVIGAGGAGM RAALQISQSG QTCALLSKVF PTRSHTVSAQ GGITVALGNT
HEDNWEWHMY DTVKGSDYIG DQDAIEYMCK TGPEAILELE HMGLPFSRLD DGRIYQRPFG
GQSKNFGGEQ AARTAAAADR TGHALLHTLY QQNLKNHTTI FSEWYALDLV KNQDGAVVGC
TALSIETGEV VYFKARATVL ATGGAGRIYQ STTNAHINTG DGVGMAIRAG VPVQDMEMWQ
FHPTGIAGAG VLVTEGCRGE GGYLLNKHGE RFMERYAPNA KDLAGRDVVA RSIMIEIREG
RGCDGPWGPH AKLKLDHLGK EVLESRLPGI LELSRTFAHV DPVKEPIPVI PTCHYMMGGI
PTKVTGQALT VNEKGEDVVV PGLFAVGEIA CVSVHGANRL GGNSLLDLVV FGRAAGLHLQ
ESIAEQGALR DASESDVEAS LDRLNRWNNN RNGEDPVAIR KALQECMQHN FSVFREGDAM
AKGLEQLKVI RERLKNARLD DTSSEFNTQR VECLELDNLM ETAYATAVSA NFRTESRGAH
SRFDFPDRDD ENWLCHSLYL PESESMTRRS VNMEPKLRPA FPPKIRTY
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