Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0634 |
Symbol | |
ID | 6271373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 604287 |
End bp | 605018 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641724831 |
Product | periplasmic pilus chaperone family protein |
Protein accession | YP_001879370 |
Protein GI | 187732072 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATTTA TGAAAGGACT ACCCCTTTTG TTGTTGGTTG CCAGTCTGTG CAGCCACGCT GCACTACAAC CCGATCGCAC TCGTATTGTG TTTAACGCTA ATGATAAAGC TACCAGTCTG CGGGTGGATA ATCGTAGCGA TAAACTCCCC TACCTCGCTT ATTCCTGGCT CGAAAATGAA AAAGGGGAGA AAAGCGATGA TCTTCTGGTC GCCCTGCCGC CGATACAACG TCTGGAACCG AAAGCAACAA CGCAGGTACG GATAGTAAAG CAAGCCTCGA CCACAAAATT ACCGGGCGAT CGCGAAACGC TATTTTTCTA CAATATGCGT GAAATTCCTC CCGCCCCGGA AAAAAACAGC GACCATGCCG TTCTGCAAGT CGCCATTCAG AGTCGTATCA AGGTGTTCTG GCGACCGGCT GCATTACGCA AGAAAGCAGG AGAAAAGGTC GAACTGCAGT TACAGGTCAG CCAGCAGGGC AACCAACTGA CACTGAAAAA TCCTACCGCG TATTATCTGA CCATTGCCTA CTTGGGACGA AATGAAAAAG GCGTTCTCCC CGGCTTCAAA ACCGTGATGG TTGCGCCTTT TAGTACGGTC AACACAAACA CCGGAAATTA TAGCGGCAGC CAGTTTTATC TCGGTTATAT GGATGATTAC GGCGCGTTAC GCATGACGAC GCTCAACTGC AGCGGACAAT GCCATTTACA AGCCGTGGAG GCGAAGAAAT GA
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Protein sequence | MTFMKGLPLL LLVASLCSHA ALQPDRTRIV FNANDKATSL RVDNRSDKLP YLAYSWLENE KGEKSDDLLV ALPPIQRLEP KATTQVRIVK QASTTKLPGD RETLFFYNMR EIPPAPEKNS DHAVLQVAIQ SRIKVFWRPA ALRKKAGEKV ELQLQVSQQG NQLTLKNPTA YYLTIAYLGR NEKGVLPGFK TVMVAPFSTV NTNTGNYSGS QFYLGYMDDY GALRMTTLNC SGQCHLQAVE AKK
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