Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0586 |
Symbol | miaB |
ID | 6271305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 558906 |
End bp | 560330 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641724790 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_001879330 |
Protein GI | 187733108 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0067501 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAAA AACTCCATAT TAAAACCTGG GGCTGTCAGA TGAACGAGTA CGATTCATCG AAGATGGCCG ATCTGCTGGA TGCCACCCAC AGCTATCAAC TGACCGACGT GGCGGAAGAA GCGGATGTGC TGCTGCTGAA CACCTGCTCA ATCCGCGAGA AGGCTCAGGA AAAAGTCTTC CATCAGTTGG GTCGCTGGAA ACTGTTAAAA GAGAAGAATC CAGACCTGAT TATCGGCGTC GGTGGCTGCG TGGCATCGCA AGAAGGCGAG CACATTCGCC AGCGCGCCCA CTATGTCGAT ATTATTTTTG GGCCGCAAAC GCTGCACCGT CTGCCGGAGA TGATCAACTC CGTGCGCGGC GACCGCAGCC CGGTTGTAGA TATCAGCTTC CCGGAAATCG AGAAGTTTGA CCGTCTACCG GAACCGCGCG CCGAAGGGCC GACCGCGTTT GTCTCCATCA TGGAAGGCTG CAATAAATAT TGCACCTACT GCGTGGTGCC TTACACCCGT GGTGAAGAGG TAAGCCGTCC GTCTGACGAT ATTCTGTTTG AGATTGCCCA GCTTGCGGCT CAGGGCGTGC GTGAAGTCAA CCTGCTCGGT CAGAACGTGA ACGCCTGGCG TGGTGAAAAC TACGACGGCT CCACCGGATC GTTTGCCGAT CTGCTGCGTC TGGTTGCTGC GATCGACGGG ATCGATCGTA TTCGCTTTAC CACCAGCCAT CCGATCGAAT TCACCGACGA TATCATCGAA GTGTATCGCG ACACGCCGGA GCTGGTGAGC TTCCTGCATC TGCCGGTACA GAGCGGTTCC GATCGCATTC TGAACCTGAT GGGCCGTACT CATACGGCAC TGGAGTACAA AGCGATCATC CGTAAACTGC GTGCGGCGCG TCCAGATATT CAGATCAGTT CTGATTTCAT CGTTGGCTTC CCTGGCGAAA CCACCGAAGA CTTCGAGAAA ACGATGAAGC TGATTGCCGA CGTCAATTTC GACATGAGCT ACAGCTTTAT CTTCTCTGCA CGTCCGGGTA CACCAGCCGC CGATATGGTT GATGATGTTC CGGAAGAAGA GAAGAAGCAG CGTCTGTATA TTCTGCAAGA ACGTATCAAT CAGCAAGCGA TGGCATGGAG CCGCCGGATG CTCGGCACCA CCCAGCGTAT TCTGGTAGAA GGGACTTCGC GTAAGAGCAT CATGGAGCTT TCCGGGCGTA CCGAAAATAA CCGCGTGGTC AACTTCGAGG GCACACCGGA TATGATCGGT AAATTCGTCG ATGTAGAAAT TACCGACGTC TACCCGAACT CTCTGCGCGG TAAAGTGGTG CGTACTGAAG ATGAAATGGG CCTGCGCGTG GCAGAAACAC CGGAATCGGT GATTGCCCGT ACCCGCAAAG AAAACGACCT TGGCGTGGGT TATTATCAGC CGTAA
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Protein sequence | MTKKLHIKTW GCQMNEYDSS KMADLLDATH SYQLTDVAEE ADVLLLNTCS IREKAQEKVF HQLGRWKLLK EKNPDLIIGV GGCVASQEGE HIRQRAHYVD IIFGPQTLHR LPEMINSVRG DRSPVVDISF PEIEKFDRLP EPRAEGPTAF VSIMEGCNKY CTYCVVPYTR GEEVSRPSDD ILFEIAQLAA QGVREVNLLG QNVNAWRGEN YDGSTGSFAD LLRLVAAIDG IDRIRFTTSH PIEFTDDIIE VYRDTPELVS FLHLPVQSGS DRILNLMGRT HTALEYKAII RKLRAARPDI QISSDFIVGF PGETTEDFEK TMKLIADVNF DMSYSFIFSA RPGTPAADMV DDVPEEEKKQ RLYILQERIN QQAMAWSRRM LGTTQRILVE GTSRKSIMEL SGRTENNRVV NFEGTPDMIG KFVDVEITDV YPNSLRGKVV RTEDEMGLRV AETPESVIAR TRKENDLGVG YYQP
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