| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0585 |
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| Symbol | ubiF |
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| ID | 6270161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 557585 |
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| End bp | 558760 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641724789 |
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| Product | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase |
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| Protein accession | YP_001879329 |
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| Protein GI | 187731309 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000000156374 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAATC AACCAACGGA AATTGCCATT GTCGGCGGAG GAATGGTCGG CGGCGCGCTG
GCGCTGGGGC TGGCACAGCA CGGATTTTCG GTAACGGTGA TCGAGCACGC AGAACCTGCA
CCGTTTGTCG CTGATAGCCA ACCGGACGTG CGGATCTCGG CGATCAGCGC CGCATCGGTA
TCATTGCTTA AAGGGTTAGG GGTCTGGGAT GCAGTACAGG CTATGCGTTG CCATCCTTAC
CGCAGACTGG AAACGTGGGA GTGGGAAACG GCGCATGTGG TGTTTGACGC CGCTGAACTT
AAGCTACCGT TGCTTGGCTA TATGGTGGAA AACACCGTCC TGCAACAGGC GCTGTGGCAG
GCGCTGGAAG CGCATCCGAA AGTAACGTTA CGTGTGCCAG GCTCGCTGAT TGCATTACAT
CGAGATAATG ATCTTCAGGA GCTGGAACTG AAGGGCGGTG AAACGATCCG CGCGAAACTG
GTGATTGGTG CCGACGGCGC AAATTCTCAG GTGCGGCAGA TGGCGGGAAT TGGCGTTCAT
GCCTGGCAGT ATGCGCAGTC GTGCATGTTG ATTAGCGTAC AGTGTGAGAA CGATCCCGGC
GACAGCACCT GGCAGCAATT TACCCCGGAC GGACCGCGTG CGTTTCTGCC GTTGTTTGAT
AACTGGGCAT CGCTGGTGTG GTATGACTCT CCGGCGCGTA TTCGCCAGTT GCAGAATATG
AATATGGCGC AACTCCAGGC GGAAATCGCG AAGCATTTCC CGTCGCGTCT GGGTTACGTT
ACACCGCTTG CCGCTGGTGC GTTTCCGCTG ACGCGCCGAC ATGCGTTGCA GTATGTGCAG
CCGGGGCTTG CGCTGGTGGG CGATGCCGCG CATACCATCC ATCCGCTGGC GGGGCAGGGG
GTGAATCTTG GTTATCGTGA TGTCGATGCC CTGATTGATG TTCTGGTGAA TGCCCGCAGT
TACGGTGAAG CGTGGGCCAG TTATCCTGTC CTCAAGCGTT ACCAGATGCG GCGCATGGCG
GATAACTTCA TTATGCAAAG TGGTATGGAT CTGTTTTATG CCGGATTCAG TAATAATCTG
CCGCCGCTGC GTTTTGTGCG TAATCTCGGG TTAATGGCGG CAGAGCGTGC TGGCGTGTTG
AAACGTCAGG CGCTGAAATA TGCGTTAGGG TTGTAG
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| Protein sequence | MTNQPTEIAI VGGGMVGGAL ALGLAQHGFS VTVIEHAEPA PFVADSQPDV RISAISAASV
SLLKGLGVWD AVQAMRCHPY RRLETWEWET AHVVFDAAEL KLPLLGYMVE NTVLQQALWQ
ALEAHPKVTL RVPGSLIALH RDNDLQELEL KGGETIRAKL VIGADGANSQ VRQMAGIGVH
AWQYAQSCML ISVQCENDPG DSTWQQFTPD GPRAFLPLFD NWASLVWYDS PARIRQLQNM
NMAQLQAEIA KHFPSRLGYV TPLAAGAFPL TRRHALQYVQ PGLALVGDAA HTIHPLAGQG
VNLGYRDVDA LIDVLVNARS YGEAWASYPV LKRYQMRRMA DNFIMQSGMD LFYAGFSNNL
PPLRFVRNLG LMAAERAGVL KRQALKYALG L
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