| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0415 |
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| Symbol | ushA |
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| ID | 6269056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 403845 |
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| End bp | 405497 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641724642 |
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| Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
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| Protein accession | YP_001879192 |
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| Protein GI | 187733948 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAT TGCAGCGGGG CGTGGCGTTA GCGCTGTTAA CCACATTTAC ACTGGCGAGT
GAAACTGCTC TGGCGTATGA GCAGGATAAA ACCTACAAAA TTACAGTTCT GCATACCAAT
GATCATCATG GGCATTTTTG GCGCAATGAA TATGGCGAAT ATGGTCTGGC GGCGCAAAAA
ACGCTGGTGG ATGGTATCCG CAAAGAGGTT GCGGCTGAAG GCGGTAGCGT GCTGCTACTT
TCCGGTGGCG ACATTAACAC TGGCGTGCCC GAGTCTGACT TACAGGATGC CGAACCTGAT
TTTCGCGGTA TGAATCTGGT GGGCTATGAC GCGATGGCGA TCGGTAATCA TGAATTTGAT
AATCCGCTCA CCGTATTACG CCAGCAGGAA AAGTGGGCCA AGTTCCCGTT GCTTTCCGCG
AATATCTATC AGAAAAGTAC CGGCGAGCGC CTGTTTAAAC CATGGGCGCT GTTTAAGCGT
CAGGATCTGA AAATTGCCGT CATTGGGCTG ACAACCGATG ACACAGCAAA AATTGGTAAC
CCGGAATACT TCACTGATGT CGAATTTCGT AAGCCCGCCG ATGAAGCGAA GCTGGTGATT
CAGGAGCTGC AACAGACAGA AAAGCCAGAC ATTATTATCG CGGCGACCCA TATGGGGCAT
TACGATAATG GTGAGCACGG CTCTAACGCA CCGGGCGATG TGGAGATGGC ACGCGCGCTG
CCTGCCGGAT CGCTGGCGAT GATCGTCGGT GGTCACTCGC AAGCTCCGGT CTGCATGGCG
GCAGAAAACA AAAAACAGGT CGATTACGTG CCGGGTACGC CATGCAAACC AGATCAACAA
AACGGCATCT GGATTGTGCA GGCGCATGAG TGGGGCAAAT ACGTGGGACG GGCTGATTTT
GAGTTTCGTA ATGGCGAAAT GAAAATGGTT AACTACCAGC TGATTCCGGT GAACCTGAAG
AAGAAAGTGA CCTGGGAAGA CGGGAAAAGC GAGCGCGTGC TTTACACTCC TGAAATCGCT
GAGAACCAGC AAATGATCTC GCTGTTATCG CCGTTCCAGA ACAAAGGCAA AGCGCAGTTG
GAAGTGAAAA TAGGCGAAAC CAATGGTCGT CTGGAAGGCG ATCGTGACAA AGTGCGTTTT
GTACAGACCA ATATGGGGCG GTTGATTCTG GCAGCCCAAA TGGATCGCAC TGGTGCCGAA
TTTGCGGTGA TGAGTGGAGG AGGAATTCGT GATTCTATCG AAGCAGGCGA TATCAGCTAT
AAAAACGTAC TGAAAGTGCA GCCATTCGGC AATGTGGTGG TGTATGCCGA CATGACCGGT
AAAGAGGTGA TTGATTACCT GACCGCCGTC ACACAAATGA AGCCAGATTC AGGTGCCTAC
CCGCAATTTG CCAACGTTAG CTTTGTGACG AAAGACGGCA AACTCAACGA CCTGAAAATC
AAAGGCGAAC CGGTCGATCC GGCGAAAACT TACCGTATGG CGACATTAAA CTTCAATGCC
ACCGGCGGTG ATGGCTATCC GCGCCTTGAT AACAAACCGG GCTATGTGAA TACCGGCTTT
ATTGATGCCG AAGTGCTGAA AGCGTATATC CAGAAAAGCT CGCCGCTGGA TGTGAGTGTT
TATGAACCGA AAGGTGAGGT GAGCTGGCAG TAA
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| Protein sequence | MKLLQRGVAL ALLTTFTLAS ETALAYEQDK TYKITVLHTN DHHGHFWRNE YGEYGLAAQK
TLVDGIRKEV AAEGGSVLLL SGGDINTGVP ESDLQDAEPD FRGMNLVGYD AMAIGNHEFD
NPLTVLRQQE KWAKFPLLSA NIYQKSTGER LFKPWALFKR QDLKIAVIGL TTDDTAKIGN
PEYFTDVEFR KPADEAKLVI QELQQTEKPD IIIAATHMGH YDNGEHGSNA PGDVEMARAL
PAGSLAMIVG GHSQAPVCMA AENKKQVDYV PGTPCKPDQQ NGIWIVQAHE WGKYVGRADF
EFRNGEMKMV NYQLIPVNLK KKVTWEDGKS ERVLYTPEIA ENQQMISLLS PFQNKGKAQL
EVKIGETNGR LEGDRDKVRF VQTNMGRLIL AAQMDRTGAE FAVMSGGGIR DSIEAGDISY
KNVLKVQPFG NVVVYADMTG KEVIDYLTAV TQMKPDSGAY PQFANVSFVT KDGKLNDLKI
KGEPVDPAKT YRMATLNFNA TGGDGYPRLD NKPGYVNTGF IDAEVLKAYI QKSSPLDVSV
YEPKGEVSWQ
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