Gene SbBS512_E0353 details

Gene Information

• Locus tag: SbBS512_E0353
• Symbol: cyoB
• ID: 6271345
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 342699
• End bp: 344690
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641724591
• Product: cytochrome o ubiquinol oxidase, subunit I
• Protein accession: YP_001879141
• Protein GI: 187734130
• COG category: [C] Energy production and conversion
• COG ID: [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1
• TIGRFAM ID: [TIGR02843] cytochrome o ubiquinol oxidase, subunit I

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCGGAA AATTATCACT TGATGCAGTC CCGTTCCATG AACCTATCGT CATGGTTACG 
ATCGCTGGCA TTATTTTGGG AGGTCTGGCG CTCGTTGGCC TGATCACTTA CTTCGGTAAG 
TGGACCTACC TGTGGAAAGA GTGGCTGACC TCCGTCGACC ATAAACGCCT CGGTATCATG 
TATATCATCG TGGCGATTGT GATGTTGCTG CGTGGTTTTG CTGACGCCAT TATGATGCGT 
AGCCAGCAGG CTCTTGCCTC GGCGGGCGAA GCGGGCTTCC TGCCACCTCA CCACTACGAT 
CAGATCTTCA CCGCGCACGG CGTGATTATG ATCTTCTTCG TGGCGATGCC TTTCGTTATC 
GGTCTGATGA ACCTGGTGGT TCCGCTGCAG ATCGGCGCGC GTGACGTTGC GTTCCCGTTC 
CTCAACAACT TAAGCTTCTG GTTTACTGTT GTTGGTGTGA TTCTGGTTAA CGTTTCTCTC 
GGCGTGGGCG AATTTGCGCA GACCGGCTGG CTGGCCTATC CACCGCTATC GGGAATAGAG 
TACAGTCCGG GAGTCGGTGT TGATTACTGG ATATGGAGTC TCCAGCTATC CGGTATAGGT 
ACGACGCTTA CCGGTATCAA CTTCTTCGTT ACCATTCTGA AGATGCGCGC ACCGGGCATG 
ACCATGTTCA AGATGCCAGT ATTTACCTGG GCATCACTGT GCGCGAACGT ACTGATTATT 
GCTTCCTTCC CAATTCTAAC GGTTACCGTC GCGTTGTTGA CCCTGGATCG CTATCTGGGC 
ACCCATTTCT TTACCAACGA TATGGGTGGC AACATGATGA TGTACATCAA CCTGATTTGG 
GCCTGGGGCC ACCCGGAAGT TTACATCCTG ATCCAGCCTG TTTTCGGTGT GTTCTCCGAA 
ATTGCGGCAA CCTTCTCGCG TAAACGTCTG TTTGGTTATA CCTCGCTGGT ATGGGCAACC 
GTCTGTATCA CCGTGCTGTC GTTCATCGTT TGGCTGCACC ACTTCTTTAC GATGGGTGCG 
GGCGCGAACG TAAACGCCTT CTTTGGTATC ACCACAATGA TTATCGCCAT CCCGACCGGG 
GTGAAGACCT TCAACTGGCT GTTCACCATG TATCAGGGCC GTATCGTGTT CCATTCTGCG 
ATGCTGTGGA CCATCGGTTT TATCGTCACT TTCTCGGTGG GCGGGATGAC TGGCGTGCTG 
CTGGCAGTAC CGGGCGCGGA CTTCGTTCTG CATAACAGCC TGTTCCTGAT TGCGCACTTC 
CATAACGTTA TCATCGGCGG CGTGGTCTTC GGCTGCTTCG CAGGGATGAC CTACTGGTGG 
CCTAAAGCGT TCGGTTTCAA ACTGAATGAA ACCTGGGGTA AACGCGCGTT CTGGTTCTGG 
ATCATCGGCT TCTTCGTTGC CTTTATGCCG CTGTATGCGC TGGGCTTCAT GGGCATGACC 
CGTCGTTTGA GCCAGCAGAT TGACCCGCAG TTCCACACCA TGCTGATGAT TGCAGCTAGC 
GGTGCAGTAC TGATTGCGCT GGGTATTCTC TGCCTCGTTA TTCAGATGTA CGTTTCTATT 
CGCGACCGCG ACCAGAACCG TGACCTGACT GGCGACCCGT GGGGTGGCCG TACGCTGGAG 
TGGGCAACCT CTTCCCCGCC TCCGTTCTAT AACTTTGCCG TTGTGCCGCA CGTTCACGAG 
CGTGATGCAT TCTGGGAAAT GAAAGAGAAA GGCGAAGCGT ATAAAAAGCC TGACCACTAT 
GAAGAAATTC ATATGCCGAA AAACAGCGGT GCAGGTATCG TCATTGCAGC TTTCTCCACC 
ATCTTCGGTT TCGCCATGAT CTGGCATATC TGGTGGCTGG CGATTGTTGG CTTCGCAGGC 
ATGATCATCA CCTGGATCGT GAAAAGCTTC GACGAGGACG TGGATTACTA CGTGCCGGTG 
GCAGAAATCG AAAAACTGGA AAACCAGCAT TTCGATGAGA TTACTAAGGC AGGGCTGAAA 
AATGGCAACT GA 

 

Protein sequence

MFGKLSLDAV PFHEPIVMVT IAGIILGGLA LVGLITYFGK WTYLWKEWLT SVDHKRLGIM 
YIIVAIVMLL RGFADAIMMR SQQALASAGE AGFLPPHHYD QIFTAHGVIM IFFVAMPFVI 
GLMNLVVPLQ IGARDVAFPF LNNLSFWFTV VGVILVNVSL GVGEFAQTGW LAYPPLSGIE 
YSPGVGVDYW IWSLQLSGIG TTLTGINFFV TILKMRAPGM TMFKMPVFTW ASLCANVLII 
ASFPILTVTV ALLTLDRYLG THFFTNDMGG NMMMYINLIW AWGHPEVYIL IQPVFGVFSE 
IAATFSRKRL FGYTSLVWAT VCITVLSFIV WLHHFFTMGA GANVNAFFGI TTMIIAIPTG 
VKTFNWLFTM YQGRIVFHSA MLWTIGFIVT FSVGGMTGVL LAVPGADFVL HNSLFLIAHF 
HNVIIGGVVF GCFAGMTYWW PKAFGFKLNE TWGKRAFWFW IIGFFVAFMP LYALGFMGMT 
RRLSQQIDPQ FHTMLMIAAS GAVLIALGIL CLVIQMYVSI RDRDQNRDLT GDPWGGRTLE 
WATSSPPPFY NFAVVPHVHE RDAFWEMKEK GEAYKKPDHY EEIHMPKNSG AGIVIAAFST 
IFGFAMIWHI WWLAIVGFAG MIITWIVKSF DEDVDYYVPV AEIEKLENQH FDEITKAGLK 
NGN