| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0317 |
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| Symbol | sbcD |
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| ID | 6272296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 309243 |
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| End bp | 310445 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641724556 |
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| Product | exonuclease subunit SbcD |
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| Protein accession | YP_001879106 |
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| Protein GI | 187732912 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.639541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCC TTCACACCTC AGACTGGCAT CTCGGCCAGA ACTTCTACAG TAAAAGCCGC
GAAGCTGAAC ATCAGGCTTT TCTTGACTGG CTGCTGGAGA CAGCACAAAC CCATCAGGTG
GATGCGATTA TTGTTGCTGG TGATGTTTTC GATACCGGCT CGCCGCCCAG TTACGCCCGC
ACGTTATACA ACCGTTTTGT TGTCAATTTA CAGCAAACTG GCTGTCATCT GGTGGTACTG
GCAGGAAACC ATGACTCGGT CGCCACGCTG AATGAATCGC GCGATATCAT GGCGTTCCTC
AATACAACCG TGGTCGCCAG CGCCGGACAT GCGCCGCAAA TCTTGCCTCG TCGCGACGGG
ACGCCAGGCG CAGTGCTGTG CTCCATTCCG TTTTTACGCC CGCGTGACAT TATTTCCAGC
CAGGCGGGGC TTAACGGTAT TGAAAAACAG CAGCATTTAC TGGCAGCGAT TACCGATTAT
TACCAACAAC ACTATGCCGA TGCCTGCAAA CTGCGCGGCG ATCAGCCTCT GCCCATCATC
GCCACGGGAC ATTTAACGAC CGTGGGTGCC AGTAAAAGTG ACGCCGTGCG TGACATTTAT
ATTGGCACGC TGGACGCGTT TCCGGCACAA AACTTTCCAC CAGCCGACTA CATAGCGCTC
GGGCATATTC ACCGCGCACA GATTATTGGC GGCATGGAAC ATGTTCGCTA TTGCGGTTCC
CCCATTCCAC TGAGTTTTGA TGAATGCGGT AAGAGTAAAT ATGTCCATCT GGTGACATTT
TCAAACGGCA AATTAGAGAG CGTGGAAAAC CTGAACGTAC CGGTAACTCA ACCCATGGCG
GTGCTGAAAG GCGATCTGGC GTCGATTACC GCACAGCTGG AACAGTGGCG CGATGTATCG
CAGGAGCCAC CTGTCTGGCT GGATATCGAA ATCACTACTG ATGAGTATCT GCATGATATT
CAGCGCAAAA TCCAGGCATT AACCGAATCA TTGCCTGTCG AAGTATTGCT GGTACGTCGG
AGTCATGAAC AGCGCGAGCG TGTGTTAGCC AGCCAACAGC GTGAAACCCT CAGCGAACTC
AGCGTCGAAG AGGTGTTCAA TCGCCGTCTG GCACTGGAAG AACTGGATGA ATCGCAGCAG
CAACGTCTGC AGCATCTTTT CACCACGACG TTGCATACCC TCGCCGGAGA ACACGAAGCA
TGA
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| Protein sequence | MRILHTSDWH LGQNFYSKSR EAEHQAFLDW LLETAQTHQV DAIIVAGDVF DTGSPPSYAR
TLYNRFVVNL QQTGCHLVVL AGNHDSVATL NESRDIMAFL NTTVVASAGH APQILPRRDG
TPGAVLCSIP FLRPRDIISS QAGLNGIEKQ QHLLAAITDY YQQHYADACK LRGDQPLPII
ATGHLTTVGA SKSDAVRDIY IGTLDAFPAQ NFPPADYIAL GHIHRAQIIG GMEHVRYCGS
PIPLSFDECG KSKYVHLVTF SNGKLESVEN LNVPVTQPMA VLKGDLASIT AQLEQWRDVS
QEPPVWLDIE ITTDEYLHDI QRKIQALTES LPVEVLLVRR SHEQRERVLA SQQRETLSEL
SVEEVFNRRL ALEELDESQQ QRLQHLFTTT LHTLAGEHEA
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