| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0175 |
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| Symbol | lpxB |
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| ID | 6270354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 190225 |
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| End bp | 191373 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641724426 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001878984 |
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| Protein GI | 187731703 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00130827 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGAAC AGCGTCCATT AACGATTGCC CTGGTCGCCG GAGAAACCTC CGGCGATATC
CTGGGGGCCG GTTTAATCCG CGCTCTGAAA GAACGTGTGC CCAACGCCCG CTTTGTTGGT
GTTGCCGGGC CACGAATGCA GGCTGAAGGC TGCGAAGCCT GGTACGAAAT GGAAGAACTG
GCGGTGATGG GCATTGTTGA AGTGCTCGGT CGTCTGCGTC GCTTACTGCA TATTCGTGCC
GATCTGACAA AGCGTTTTGG CGAACTGAAG CCAGATGTTT TTGTTGGTAT TGATGCGCCT
GACTTCAATA TTACTCTTGA AGGTAACCTC AAAAAGCAGG GTATCAAAAC CATTCATTAC
GTCAGTCCGT CAGTCTGGGC GTGGCGACAG AAACGTGTTT TCAAAATAGG CAGAGCCACC
GATCTGGTGC TCGCATTTCT GCCTTTCGAA AAAGCGTTTT ATGACAAATA CAACGTACCG
TGCCGCTTTA TCGGTCATAC CATGGCTGAT GCCATGCCAT TAGATCCAGA TAAAAATGCC
GCCCGTGATG TGCTGGGGAT CCCTCACGAT GCCCACTGCC TGGCGTTGCT ACCGGGGAGC
CGTGGTGCAG AAGTTGAAAT GCTTAGTGCC GATTTCCTGA AAACGGCCCA GCTTTTGCGC
CAGACATATC CGGATCTCGA AATCGTGGTG CCACTGGTGA ATGCCAAACG CCGCGAGCAG
TTTGAACGCA TCAAAGCTGA AGTCGCGCCA GACTTTTCAG TTCATTTGCT GGATGGGATG
GGCCGTGAGG CGATGGTCGC CAGCGATGCG GCGCTACTGG CGTCGGGTAC GGCAGCCCTG
GAGTGTATGC TGGCGAAATG CCCGATGGTG GTGGGATATC GCATGAAGCC TTTTACCTTC
TGGTTGGCGA AGCGGCTGGT GAAAACTGAT TATGTCTCGC TGCCAAATCT GCTGGCGGGC
AGAGAGTTAG TCAAAGAGTT ATTGCAGGAA GAGTGTGAGC CGCAAAAACT GGCTGCGGCG
CTGTTACCGC TGTTGGCGAA CGGGAAAATC AGCCACGCGA TGCACGATAC CTTCCGTGAA
CTGCATCAGC AGATCCGCTG CAATGCCGAT GAGCAGGCGG CACAAGCCGT TCTGGAGTTA
GCACAATGA
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| Protein sequence | MTEQRPLTIA LVAGETSGDI LGAGLIRALK ERVPNARFVG VAGPRMQAEG CEAWYEMEEL
AVMGIVEVLG RLRRLLHIRA DLTKRFGELK PDVFVGIDAP DFNITLEGNL KKQGIKTIHY
VSPSVWAWRQ KRVFKIGRAT DLVLAFLPFE KAFYDKYNVP CRFIGHTMAD AMPLDPDKNA
ARDVLGIPHD AHCLALLPGS RGAEVEMLSA DFLKTAQLLR QTYPDLEIVV PLVNAKRREQ
FERIKAEVAP DFSVHLLDGM GREAMVASDA ALLASGTAAL ECMLAKCPMV VGYRMKPFTF
WLAKRLVKTD YVSLPNLLAG RELVKELLQE ECEPQKLAAA LLPLLANGKI SHAMHDTFRE
LHQQIRCNAD EQAAQAVLEL AQ
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