| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0105 |
|---|
| Symbol | aroP |
|---|
| ID | 6272111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 111804 |
|---|
| End bp | 113174 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641724361 |
|---|
| Product | aromatic amino acid transporter |
|---|
| Protein accession | YP_001878920 |
|---|
| Protein GI | 187731561 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.138905 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGGTC AACAGCACGG CGAGCAGCTA AAGCGCGGCC TTAAAAACCG CCATATTCAG
CTTATCGCGC TGGGTGGCGC GATAGGGACC GGGTTATTCC TGGGTAGCGC CTCCGTAATA
CAGTCCGCAG GGCCAGGGAT TATCCTGGGT TACGCCATTG CTGGTTTTAT CGCCTTTCTG
ATCATGCGTC AGCTGGGTGA AATGGTGGTC GAAGAACCTG TCGCAGGCTC CTTTAGCCAC
TTTGCTTATA AATACTGGGG CAGTTTTGCC GGTTTCGCCT CTGGCTGGAA CTACTGGGTA
CTGTACGTTT TAGTTGCCAT GGCTGAGCTG ACTGCCGTGG GTAAATACAT TCAGTTCTGG
TATCCGGAAA TCCCCACCTG GGTTTCTGCC GCCGTATTCT TTGTGGTGAT TAACGCCATC
AACCTGACCA ACGTTAAAGT GTTTGGCGAG ATGGAGTTCT GGTTTGCCAT TATCAAAGTT
ATCGCGGTGG TAGCGATGAT CATCTTCGGC GGCTGGCTGC TATTCAGTGG CAACAGCGGC
CCGCAGGCGA CCGTTAGCAA CCTGTGGGAT CAGGGTGGTT TCCTGCCGCA CGGCTTCACC
GGGCTGGTGA TGATGATGGC GATTATCATG TTCTCGTTCG GTGGTCTGGA ACTGGTGGGG
ATCACCGCAG CAGAAGCTGA TAACCCGGAG CAAAGTATAC CGAAAGCAAC TAACCAGGTT
ATCTACCGCA TCCTGATTTT CTATATTGGT TCGTTAGCCG TTCTGCTCTC ACTGATGCCG
TGGACCCGCG TTACCGCCGA TACCAGTCCG TTTGTGCTGA TCTTCCACGA GTTAGGCGAT
ACCTTTGTGG CGAATGCGCT GAACATCGTG GTACTGACTG CGGCGCTCTC CGTGTACAAC
AGCTGCGTAT ATTGCAACAG CCGTATGCTG TTTGGTCTGG CACAACAGGG TAATGCGCCA
AAAGCGCTGG CGTCTGTCGA TAAACGTGGT GTACCAGTAA ATACCATTCT GGTGTCTGCA
CTGGTAACGG CGTTGTGCGT ACTGATTAAC TACCTTGCCC CAGAGTCCGC TTTCGGACTG
TTAATGGCGC TGGTGGTATC TGCACTGGTA ATCAACTGGG CGATGATTAG CCTGGCGCAT
ATGAAATTCC GTCGCGCCAA GCAGGAACAA GGCGTGGTAA CTCGCTTCCC TGCTCTGCTT
TATCCGCTGG GTAACTGGAT CTGCCTGCTG TTTATGGCGG CGGTACTGGT GATTATGCTG
ATGACCCCAG GAATGGCGAT TTCGGTATAC CTGATCCCGG TATGGCTGAT CGTGTTAGGT
ATCGGCTATC TGTTTAAAGA GAAAACCGCC AAAGCCGTAA AAGCGCATTA A
|
|---|
| Protein sequence | MEGQQHGEQL KRGLKNRHIQ LIALGGAIGT GLFLGSASVI QSAGPGIILG YAIAGFIAFL
IMRQLGEMVV EEPVAGSFSH FAYKYWGSFA GFASGWNYWV LYVLVAMAEL TAVGKYIQFW
YPEIPTWVSA AVFFVVINAI NLTNVKVFGE MEFWFAIIKV IAVVAMIIFG GWLLFSGNSG
PQATVSNLWD QGGFLPHGFT GLVMMMAIIM FSFGGLELVG ITAAEADNPE QSIPKATNQV
IYRILIFYIG SLAVLLSLMP WTRVTADTSP FVLIFHELGD TFVANALNIV VLTAALSVYN
SCVYCNSRML FGLAQQGNAP KALASVDKRG VPVNTILVSA LVTALCVLIN YLAPESAFGL
LMALVVSALV INWAMISLAH MKFRRAKQEQ GVVTRFPALL YPLGNWICLL FMAAVLVIML
MTPGMAISVY LIPVWLIVLG IGYLFKEKTA KAVKAH
|
|---|
| |