Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E0091 |
Symbol | secM |
ID | 6270008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 98599 |
End bp | 99186 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641724349 |
Product | SecA regulator SecM |
Protein accession | YP_001878908 |
Protein GI | 187732984 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000000360743 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTGGA CTTCAGGCTT TAATGATAAG ATTTGTGCGC TAAATACGTT TGAATTCGAT CGGGATGGCA ATAACGTGAG TGGAATACTG ACGCGCTGGC GACAGTTTGG TAAACGCTAC TTCTGGCCGC ATCTCTTATT AGGGATGGTC GCGGCGAGTT TCGGTTTGCC TGCGCTCAGC AACGCCGCCG AACCAAACGT GCCCGCAAAA GCGACAACCC GCAACCACGA GCCTTCAGCC AAAGTTAACT TTGGTCAATT GGCCTTGCTG GAAGCGAACA CACGCCGCCC GAATTCGAAC TATTCCGTTG ATTACTGGCA TCAATATGCC ATTCGCACGG TAATCCGTCA TCTTTCTTTC GCAATGGCAC CGCAAACACT GCCCGTTGCT GAAGAATCTT TGCCTCTTCA GGCGCAACAT CTTGCATTAC TGGATACGCT CAGCGCGCTG CTGACCCAGG AAGGCACGCC GTCTGAAAAG GGTTATCGCA TTGATTATGC GCATTTTACC CCACAAGCAA AATTCAGCAC GCCCGTCTGG ATAAGCCAGG CGCAAGGCAT CCGTGCTGGC CCTCAACGCC TCACCTAA
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Protein sequence | MLWTSGFNDK ICALNTFEFD RDGNNVSGIL TRWRQFGKRY FWPHLLLGMV AASFGLPALS NAAEPNVPAK ATTRNHEPSA KVNFGQLALL EANTRRPNSN YSVDYWHQYA IRTVIRHLSF AMAPQTLPVA EESLPLQAQH LALLDTLSAL LTQEGTPSEK GYRIDYAHFT PQAKFSTPVW ISQAQGIRAG PQRLT
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