| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0078 |
|---|
| Symbol | murE |
|---|
| ID | 6272718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 84135 |
|---|
| End bp | 85622 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641724336 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
|---|
| Protein accession | YP_001878895 |
|---|
| Protein GI | 187732212 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGATC GTAATTTGCG CGACCTTCTT GCTCCGTGGG TGCCAGACGC ACCTTCGCGA
GCACTGCGAG AGATGACACT CGACAGCCGT GTGGCTGCGG CGGGCGATCT CTTTGTAGCT
GTAGTAGGTC ATCAGGCGGA CGGGCGTCGA TATATCCCGC AGGCGATAGC GCAAGGTGTG
GCTGCCATTA TTGCAGAGGC GAAAGATGAG GCGACCGACG GTGAAATCCG TGAAATGCAC
GGCGTACCGG TCATCTATCT CAGCCAGCTC AACGAGCGTT TATCTGCACT GGCGGGCCGC
TTTTACCATG AACCCTCTGA CAATTTACGT CTCGTAGGCG TAACGGGCAC CAACGGCAAA
ACCACGACTA CCCAGCTGCT GGCGCAGTGG AGCCAACTGC TTGGCGAAAC CAGCGCGGTA
ATGGGCACCG TTGGTAACGG TCTGCTGGGG AAAGTGATCC CGACAGAAAA TACCACCGGT
TCGGCAGTCG ATGTTCAGCA TGAGCTGGCG GGGCTGGTGG AGCAGGGCGC GACGTTTTGC
GCAATGGAAG TTTCCTCCCA CGGGCTGGTA CAGCACCGTG TGGCGGCATT GAAATTTGCG
GCGTCGGTCT TTACCAACTT AAGCCGCGAT CACCTTGATT ATCATGGTGA TATGGAACAC
TACGAAGCTG CGAAATGGCT GCTTTATTCT GAACATCATT GCGGTCAGGC GATTATTAAC
GCCGACGATG AAGTGGGCCG CCGTTGGCTG GCAAAGCTGC CGGACGCGGT TGCGGTATCA
ATGGAAGATC ATATTAATCC GAACTGTCAC GGACGCTGGT TAAAAGTGAT CGACGTGAAC
TATCACGACA GCGGTGTGAC GATTCGCTTT AGCTCAAGTT GGGGCGATGG CGAAATTGAA
AGCCATCTGA TAGGCGCTTT TAACGTCAGC AACCTGCTGC TCGCGCTGGC GACACTGTTG
GCACTCGGCT ATCCATTGGC TGATCTGTTG AAAACCGCCG CGCGTCTGCA ACCGGTTTGC
GGACGTATGG AAGTGTTCAC TGCGCCAGGC AAACCGACGG TGGTGGTGGA TTACGCGCAT
ACGCCGGATG CACTGGAAAA AGCCTTACAG GCGGCGCGTC TGCACTGTGC GGGCAAGCTG
TGGTGTGTCT TTGGCTGTGG TGGCGATCGC GATAAAGGTA AGCGTCCACT GATGGGCGCA
ATTGCCGAAG AGTTTGCTGA CGTGGCGGTG GTGACGGACG ATAACCCGCG TACCGAAGAA
CCGCGTGCCA TCATCAACGA TATTCTGGCG GGAATGTTAG ATGCCGGACA TGCCAAAGTG
ATGGAAGGCC GTGCTGAAGC GGTGACTTGC GCCGTTATGC AGGCTAAAGA GAACGATGTG
GTGCTGGTCG CGGGCAAAGG CCATGAAGAT TACCAGATTG TTGGCAATCA GCGTCTGGAC
TACTCCGATC GCGTCACGGT GGCGCGTCTG CTGGGGGTGA TTGCATGA
|
|---|
| Protein sequence | MADRNLRDLL APWVPDAPSR ALREMTLDSR VAAAGDLFVA VVGHQADGRR YIPQAIAQGV
AAIIAEAKDE ATDGEIREMH GVPVIYLSQL NERLSALAGR FYHEPSDNLR LVGVTGTNGK
TTTTQLLAQW SQLLGETSAV MGTVGNGLLG KVIPTENTTG SAVDVQHELA GLVEQGATFC
AMEVSSHGLV QHRVAALKFA ASVFTNLSRD HLDYHGDMEH YEAAKWLLYS EHHCGQAIIN
ADDEVGRRWL AKLPDAVAVS MEDHINPNCH GRWLKVIDVN YHDSGVTIRF SSSWGDGEIE
SHLIGAFNVS NLLLALATLL ALGYPLADLL KTAARLQPVC GRMEVFTAPG KPTVVVDYAH
TPDALEKALQ AARLHCAGKL WCVFGCGGDR DKGKRPLMGA IAEEFADVAV VTDDNPRTEE
PRAIINDILA GMLDAGHAKV MEGRAEAVTC AVMQAKENDV VLVAGKGHED YQIVGNQRLD
YSDRVTVARL LGVIA
|
|---|
| |