| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0025 |
|---|
| Symbol | |
|---|
| ID | 6273187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 23306 |
|---|
| End bp | 23725 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641724285 |
|---|
| Product | transposase family |
|---|
| Protein accession | YP_001878845 |
|---|
| Protein GI | 187731593 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2963] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000000000603896 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAGA AAGCATTATC TGCAGAACCC CGCAGATCAT TTTCAAATGA GTTTAAACTT
CAAATGGTTA AACTGGCTTC ACAACCAGGA GCCTCTGTTG CCCGTATTGC CCGGGAACAC
GATATCAATG ATAACCTGCT GTTCAAATGG CTCAGGCTCT GGCAGAACGA AGGGCGCATA
TCGCGGCGTC TTCCGGTAAC AACCTCTTCT GACACTGGCG TTGAATTGTT ACCTGTGGAG
ATAACGCCGG ATGAGCCGAA AGAACCGGTG GCTGCTCTTA CTCCGTCTTT ATCTACTCAG
ACTACAGTTA GTGCCAGCTC CTGCAAGGTG GAGTTCCGTC ACGGTAACAT GACGCTGGAA
AATCCTTCAC CAGAGCTGCT CACAGTGTTG ATCCGTGAAC TGACCGGGAG GGGACGATGA
|
|---|
| Protein sequence | MEQKALSAEP RRSFSNEFKL QMVKLASQPG ASVARIAREH DINDNLLFKW LRLWQNEGRI
SRRLPVTTSS DTGVELLPVE ITPDEPKEPV AALTPSLSTQ TTVSASSCKV EFRHGNMTLE
NPSPELLTVL IRELTGRGR
|
|---|
| |