| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0006 |
|---|
| Symbol | |
|---|
| ID | 6271698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 5682 |
|---|
| End bp | 6458 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641724266 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001878826 |
|---|
| Protein GI | 187731324 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATTC TTATTTCACC TGCGAAAACG CTTGATTACC AAAGCCCGTT GACCACCACG
CGCTATACGC TGCCGGAGCT GTTAGACAAT TCCCAGCAGT TGATCCATGA AGCGCGGAAA
CTGACGCCTC CGCAGATTAG CACGCTGATG CGCATCAGCG ACAAACTGGC GGGTATCAAC
GCCGCTCGCT TTCATGACTG GCAGCCAGAT TTCACGCCGG CGAATGCCCG CCAGGCGATT
CTGGCGTTTA AAGGTGATGT CTACACCGGC TTGCAGGCCG AAACCTTCAG CGAAGACGAT
TTCGATTTTG CCCAACAGCA TTTGCGAATG CTTTCCGGCT TGTATGGCGT ACTGCGCCCG
CTCGATTTAA TGCAGCCTTA TCGTCTGGAA ATGGGGATCC GTCTTGAGAA TGCCCGAGGG
AAAGATCTGT ATCAATTCTG GGGAGATATC ATCACCAACA AGCTGAACGA GGCGCTCGCA
GCACAAGGCG ATAATGTGGT GATTAATCTG GCGTCAGATG AGTATTTTAA ATCGGTGAAG
CCGAAGAAAT TGAATGCCGA GATTATCAAG CCGGTGTTCC TCGATGAGAA GAACGGCAAA
TTTAAGATCA TCAGCTTCTA CGCTAAGAAA GCACGCGGTC TGATGAGTCG TTTCATTATT
GAAAATCGGC TGACCAAACC AGAGCAACTG ACTGGTTTTA ATAGCGAAGG TTACTTCTTT
GATGAAGCTT CCTCCAGCAA TGGCGAACTG GTGTTTAAAC GCTACGAGCA GCGTTAA
|
|---|
| Protein sequence | MLILISPAKT LDYQSPLTTT RYTLPELLDN SQQLIHEARK LTPPQISTLM RISDKLAGIN
AARFHDWQPD FTPANARQAI LAFKGDVYTG LQAETFSEDD FDFAQQHLRM LSGLYGVLRP
LDLMQPYRLE MGIRLENARG KDLYQFWGDI ITNKLNEALA AQGDNVVINL ASDEYFKSVK
PKKLNAEIIK PVFLDEKNGK FKIISFYAKK ARGLMSRFII ENRLTKPEQL TGFNSEGYFF
DEASSSNGEL VFKRYEQR
|
|---|
| |