Gene SbBS512_A0292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_A0292 
Symbol 
ID6273383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010660 
Strand
Start bp198186 
End bp198635 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content53% 
IMG OID641728905 
Productputative transposase 
Protein accessionYP_001883295 
Protein GI187734493 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1.4660800000000001e-26 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGCT ACGACCTTCC CGATGAGGCA TGGACCATCA TCAAGCCCCT GTTACCTCCT 
GAACCCGCCA CACCACGGGC CGGACGCCCA TGGGCTGAGC ACCGTAAAAT CATCAATGGC
ATGTTCTGGG TGTTATGTTC CGGTGCACCA TGGCGCGATT TACCCGAACG ATATGGGGCA
TGGAAAACTG TTTATAACCG CTTTAACCGA TGGTCAAAGT CAGGCGTGAT TAATATTATT
TTCAACAGGT TGCTTTCGCT ACTTGATGCA AACGGCTTTA TTGACTGGTC TGCCACCGCG
CTGGATGGCA GTAATATCCG GGCGCTGAAA TGTGCCGCCG GTGCTCAAAA AAACATCCCG
ATATCGACGG AGATAATGGG CCGGGTCGCT CTCGCGGCGG TTTTGGCACC AAAATCCATC
TGGCAACAGA CGGAAGTGGC CTCCCGTTAA
 
Protein sequence
MARYDLPDEA WTIIKPLLPP EPATPRAGRP WAEHRKIING MFWVLCSGAP WRDLPERYGA 
WKTVYNRFNR WSKSGVINII FNRLLSLLDA NGFIDWSATA LDGSNIRALK CAAGAQKNIP
ISTEIMGRVA LAAVLAPKSI WQQTEVASR