Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_A0286 |
Symbol | |
ID | 6273564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010660 |
Strand | - |
Start bp | 195451 |
End bp | 196650 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641728899 |
Product | IS1294, transposase |
Protein accession | YP_001883289 |
Protein GI | 187734340 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1.08654e-28 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGTCCG CTTTTACTCC CCGATCGCTG AAACGCCTGT TCACAGCCAA CCAGTGCTGG ACGTCCTTCC TGGATGCGGG CGGTCTGCGC GATATCGGGG TTGAGGCTGT CACAAAAATG CTGGCCTGCG GCACGCGGAT ACTGGGAGTG AAGGAATACA TCTGCGATAA ACCTGAGTGC CCCCACGTCA GATACGTCAC TAACTCATGC GGCAGCCGTG CCTGCCCGTC CTGCGGAAAA AAGGCCACAG ACCTGTGGAT AGCGACACAG CTGAATCGTC TTCCTGACTG CGACTGGGTA CACCTGGTCT TCACCCTGCC GGACACGCTG TGGCCGGTGT TCGAAAGCAA CCGGTGGCTG CTGAATGACG TGTGCCGTCT GGCGGTGGAG AATCTGCTGT ATGCCGCCCG GAAACGGGGG CAGGAACCCG GTATCTTCTG CGCCATCCAC ACGTATGGCC GTCGTCTCAA CTGGCATCCG CATGTACATG TGTCTGTAAC CTGTGGAGGT CTGAATAAGC ATGGTCAGTG GAAAAAGCTG AGCTTCCTGA AAGACTCGAT GCGTTCACGG TGGATGTGGA ATATGCGGCA GCTGCTTCTG AAAGCGTGGT CAGAGGGGCT GGCGATGCCG GAGTCGTTGT CACATATCAC GACGGAATCA CAGTGGAGAA GCCTGGTGCT GAAAGCCGGA GGAAAATACT GGCATGTGTA CATGTCGAAA AAAACGGCCG GCGGGAGGAA TACGGCGCGC TACCTGGGTC GTTATCTGAA GAAGCCGCCG ATAGCGGCCT CCCGGCTGGC ACATTACAAC GTAGGGGCGA GCCTGAACTT CCGTTACCTG GACCACAAAA CGGGAGAAAC GGCGACGGAA ACGCTGACAC AGCGTGAGCT GGTCGCGAGG CTGAAACAGC ACATCCCGGG GAAGTTTTTT AAGATGGTGA GGTACTTCGG GTTCCTTGCC AACCGGGTGT GTGGAGAGAA GCTGCCGCAG GTGTACCGTG CTCTGGGGAT GGATAAACAG GAACCAGTGG CGAAAGTGTG CTATGCACAA ATGGTGAAAC AGTTCCTGAG TCGTGACCCG TTCGAATGCG TGCTGTGTGG CGGCCGGATG GTATACCGCC GGGCCATCGC GGGACTGAAT GTGGAGGAGC TGAAGAAAAA CGCGCGGGAT ATCAGTCTGC TGAGGTATAT GCCGGCCTGA
|
Protein sequence | MLSAFTPRSL KRLFTANQCW TSFLDAGGLR DIGVEAVTKM LACGTRILGV KEYICDKPEC PHVRYVTNSC GSRACPSCGK KATDLWIATQ LNRLPDCDWV HLVFTLPDTL WPVFESNRWL LNDVCRLAVE NLLYAARKRG QEPGIFCAIH TYGRRLNWHP HVHVSVTCGG LNKHGQWKKL SFLKDSMRSR WMWNMRQLLL KAWSEGLAMP ESLSHITTES QWRSLVLKAG GKYWHVYMSK KTAGGRNTAR YLGRYLKKPP IAASRLAHYN VGASLNFRYL DHKTGETATE TLTQRELVAR LKQHIPGKFF KMVRYFGFLA NRVCGEKLPQ VYRALGMDKQ EPVAKVCYAQ MVKQFLSRDP FECVLCGGRM VYRRAIAGLN VEELKKNARD ISLLRYMPA
|
| |