| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_A0168 |
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| Symbol | ipgF |
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| ID | 6273546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010660 |
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| Strand | + |
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| Start bp | 113624 |
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| End bp | 114082 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641728806 |
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| Product | protein IpgF |
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| Protein accession | YP_001883197 |
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| Protein GI | 187734382 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 109 |
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| Plasmid unclonability p-value | 0.00546577 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCCGTT TCGTATTTAT TTTTCTGTGT TTTATCCCAT ATTTAGGGAG AGCTGATTGT
TGGGATAAGG CTGGTGAAAG GTACAACATT CCATCGAGTT TGTTAAAAGC GATTGCGGAA
AAAGAATCCG GATTTAATAA ATTTGCAGTC AATGTTAATA ACAATGGAAG TAAAGATTAT
GGTATAATGC AAATAAATGA CTTTCATTCT AAAAGACTTA GAGAAATGGG ATATACTGAG
GAAATGCTAA TTAGTCATCC ATGTCTTTCT GTACATTATG CAGCAAAGTT ATTAAATGAG
TTTATGCTGA TGTATGGAAG AGGGTGGGAG GCTGTTGGTG CCTATAATGC AGGAACATCT
CCGAAAAAGA AAAAAGAAAG ATTAAAGTAC GCAGAGGATA TCTATAAACG CTATTTGCGG
ATAGCAGCAG AGAGCAAGCA GAATAATCGA AGGATATAA
|
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| Protein sequence | MSRFVFIFLC FIPYLGRADC WDKAGERYNI PSSLLKAIAE KESGFNKFAV NVNNNGSKDY
GIMQINDFHS KRLREMGYTE EMLISHPCLS VHYAAKLLNE FMLMYGRGWE AVGAYNAGTS
PKKKKERLKY AEDIYKRYLR IAAESKQNNR RI
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