Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_A0134 |
Symbol | |
ID | 6273425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010660 |
Strand | + |
Start bp | 86768 |
End bp | 87658 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641728777 |
Product | IS629 transposase orfB |
Protein accession | YP_001883168 |
Protein GI | 187734426 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 140 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATGCCAC TGCTGGATAA GCTGCGTAAG CTGTACGGGG TCGGACCGGT ATGCAGTGAA CTACATATTG CCCCGTCAAC GTATTACCAC TGTCAGCAAC AGCGACATCA TCCGGATAAA CGCAGTGCCC GTGCGCAGCG CGATGACTGG CTGAAGAAAG AGATACTGCG CGTATACGAT GGGAATCATC AGGTATACGG TGTGCGTAAA GTCTGGCGTC AGTTGTTACG GGAAGGTATC AGAGTGGCCA GATGCACTGT GGCACGTCTC ATGGCGGTTA TGGGACTTGC CGGTGTTCTC CGGGGTAAAA AGGTCCGTAC GACCATCAGC CGGAAAGCCG TTGCCGCAGG CGACCGCGTA AACCGTCAGT TCGTGGCAGA ACGACCTGAC CAGCTGTGGG TGGCTGATTT TACTTACGTC AGCACATGGC AGGGCTTCGT CTATGTGGCG TTCATCATTG ATGTGTTTGC CGGATACATC GTGGGGTGGC GGGTCTCATC GTCCATGGAA ACGACATTCG TGCTGGATGC TCTGGAGCAG GCGTTATGGG CCCGTCGACC GTCCGGCACG GTCCATCACA GTGATAAAGG TTCTCAGTAT GTATCGCTGG CCTACACACA GCGGCTTAAG GAAGCCGGAT TACTGGCATC AACAGGAAGT ACAGGCGACT CGTATGACAA CGCGATAGCG GAGAGCATCA ATGGTCTTTA CAAAGCGGAG GTAATACACC GTAAGAGCTG GAAAAACCGT GCAGAAGTGG AACTGGCCAC ACTCACGTGG GTGGACTGGT ATAACAATCG ACGATTGCTG GAAAGGCTGG GCCATACTCC TCCGGCAGAA GCAGAAAAAG CTTATTATGC TTCCATCGGA AACGATGATC TGGCAGCCTG A
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Protein sequence | MMPLLDKLRK LYGVGPVCSE LHIAPSTYYH CQQQRHHPDK RSARAQRDDW LKKEILRVYD GNHQVYGVRK VWRQLLREGI RVARCTVARL MAVMGLAGVL RGKKVRTTIS RKAVAAGDRV NRQFVAERPD QLWVADFTYV STWQGFVYVA FIIDVFAGYI VGWRVSSSME TTFVLDALEQ ALWARRPSGT VHHSDKGSQY VSLAYTQRLK EAGLLASTGS TGDSYDNAIA ESINGLYKAE VIHRKSWKNR AEVELATLTW VDWYNNRRLL ERLGHTPPAE AEKAYYASIG NDDLAA
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