Gene SbBS512_A0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_A0005 
Symbol 
ID6273618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010660 
Strand
Start bp1894 
End bp2760 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content33% 
IMG OID641728683 
ProductOspB 
Protein accessionYP_001883074 
Protein GI187734305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones140 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAG ATGGTGTTAG ACCATACTGT AGAATAGTCA ATAAAAAGAA TGAAAGCATA 
TCAGATATTG CATTTGCACA TATAATAAAA AGGGTAAAAA ATTCATCATG TACTCACCCA
AAAGCAGCAT TGGTTTTTTT AGGAGAGAAA GGTTTTTGTG ATAGCAATGA TGTTCTATCT
ATTATGGGAC AACAAATACC AAGAGTATTT AAGAACAAGA TGTTATATGA TTATGTTTTT
AAAAATGAAA AAAGTAAAAA TGATTTTCTA AAAATGGCTG AATCATGGCT ACCACAGAGT
GAACCAATAG TAATAAATAA TGATGATGAC GCATTGAATG CTGCTGCTTA TTTTTCTGTA
AAAAAAGCGA AAATAAAAAC AGTAAACGAT ACTGATTTTA AAGAGTATAA TAAGGTTTAT
ATTCTTGGGC ACGGTAGTCC TGGTTCTCAT CAATTAGGCC TTGGTTCGGA ACTTATTGAT
GTACAAACAA TCATTTCAAG AATGAAAGAC TGTGGTATTC TAAATGTGAA AGATATCCGT
TTTACTTCAT GCGGCTCCGC TGATAAAGTG GCTCCTAAAA ATTTTAACAA TGCCCCTGCT
GAAAGTCTTT CTTGTATCCT TAACTCTCTG CCTTTTTTTA AGGAAAAAGA ATCTTTGCTA
GAGCAGATAA AAAAACACCT TGAAAACGAT GAGTCATTGA GTGATGGTCT AAAAATATCC
GGCTATCATG GATATGGAGT TCACTATGGT CAAGAGCTTT TTCCCTACTC ACATTATCGT
TCAACTTCAA TTCCTGCTGA TCCGGAGCAT ACAGTAAAAA GAAGCTCTCA GAAAAAGACT
TTTATTATTA ATAAAGAACT GGATTAG
 
Protein sequence
MNLDGVRPYC RIVNKKNESI SDIAFAHIIK RVKNSSCTHP KAALVFLGEK GFCDSNDVLS 
IMGQQIPRVF KNKMLYDYVF KNEKSKNDFL KMAESWLPQS EPIVINNDDD ALNAAAYFSV
KKAKIKTVND TDFKEYNKVY ILGHGSPGSH QLGLGSELID VQTIISRMKD CGILNVKDIR
FTSCGSADKV APKNFNNAPA ESLSCILNSL PFFKEKESLL EQIKKHLEND ESLSDGLKIS
GYHGYGVHYG QELFPYSHYR STSIPADPEH TVKRSSQKKT FIINKELD