Gene SbBS512_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_0017 
Symbol 
ID6268355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010657 
Strand
Start bp11279 
End bp11629 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content49% 
IMG OID641724225 
Producthypothetical protein 
Protein accessionYP_001878785 
Protein GI187730002 
COG category[K] Transcription 
COG ID[COG3636] Predicted transcriptional regulator 
TIGRFAM ID[TIGR02684] probable addiction module antidote protein 


Plasmid Coverage information

Num covering plasmid clones149 
Plasmid unclonability p-value0.447593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCCA CCAAAAATGT GAAGTCGCAG AAAAATGATT ATCCGGCATC CGTTGATCAC 
AATGCCGCCA TGATTGAAGA ATTGCGCGCA GATCCTGATT ATGCAAACGC TTATCTTGCT
AATGCCCTGG AAGAAATAAA CGAGCCTGGT GGTTTAGGTG GTTTTCTTGT TGCGCTACGT
CAGGTAATCG AGGCGCGAGG GGGGATTTCC GAAGCTGCCA GGAAATCTGG CCTTGCCCGT
CAGAGTATTT ACCGCGCATT ATCCCCCAAC GGTAACCCGA CCATCACAAC GCTTGCACAA
CTTACATCGG TAGCCGGATT ACAGTTCACT CTCAGTAAAT CCAGCCACTA A
 
Protein sequence
MTATKNVKSQ KNDYPASVDH NAAMIEELRA DPDYANAYLA NALEEINEPG GLGGFLVALR 
QVIEARGGIS EAARKSGLAR QSIYRALSPN GNPTITTLAQ LTSVAGLQFT LSKSSH