Gene SbBS512_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_0015 
Symbolpir 
ID6268315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010657 
Strand
Start bp8826 
End bp9698 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content33% 
IMG OID641724223 
Productreplication initation protein Pi 
Protein accessionYP_001878783 
Protein GI187729990 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones119 
Plasmid unclonability p-value0.0264408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATGA CGACAAATAA GACTTCCCTT TCTCGCTTAA CAAAAGTGAG ACATCGAAAT 
GAATTGAATT CAACGCTGTC AACATTGCCT ATGGCTGCTA AAAAAGTCTT ATTTTTAGCC
ATGTGCCAGA TAAACTCTAA AAATGAATTC GATGATGATC ACATATTTTA TGTGACAGTT
GCCGATTACA TTAAATGGGT TCAGGTTAAG CCTGATGCGG CTTATCTTGC TTTGAGGGAT
GGCTCTAATA TATTAGATAC GACGCTTCTT AAGCTGAAAC ATGATGAAAT ATTAGAACTG
AGTAGTGATT TGGGATTTAA GTTCACTAAA AGTAATGTAC CTGATTCAAT GAATTTGAGT
CTGACTGTTT TTTCTACTTA TTACAGGAAT GAAGGTAGAG TGGGGATCAA GTTTACAAAA
GAAGCGAAAA GATTTTTATG TAAACTTATT GGTGAAGAAA AACGTTATAC AACGCAAGTT
TTATTATCTG TTGTTCGACT GACAAGTGTT AATGCTGCAT CACTATATCA ACTCATTCGT
AAAATATATA GTAATAATTC TCGCGCGAAT AGTTTTGAAA TGACAATAGA TGAACTTAAA
GATGAATTGA ATCTTTATAC AATAGGGGCG GGGGGGGTGA AGGATTATAA GTATCCAGAT
TATCCTGCTT TTAAAAGAGA TGTTCTTAAT AAATCAGTAA AAGAAATCAT GAAACATACG
GAAGTAAAGA ACTTAAGTTT CGTAGTTTCA GAAAAAATTG GGAGAAAAGT TTATAAATTA
AAATTCTCTT ATACAATTGG TTATGAGGGC GATACCAGGG AAGACTCAGA GTTTACTAAT
ATGTTTGATA AAATGTACCC ACCTGAAAAT TGA
 
Protein sequence
MRMTTNKTSL SRLTKVRHRN ELNSTLSTLP MAAKKVLFLA MCQINSKNEF DDDHIFYVTV 
ADYIKWVQVK PDAAYLALRD GSNILDTTLL KLKHDEILEL SSDLGFKFTK SNVPDSMNLS
LTVFSTYYRN EGRVGIKFTK EAKRFLCKLI GEEKRYTTQV LLSVVRLTSV NAASLYQLIR
KIYSNNSRAN SFEMTIDELK DELNLYTIGA GGVKDYKYPD YPAFKRDVLN KSVKEIMKHT
EVKNLSFVVS EKIGRKVYKL KFSYTIGYEG DTREDSEFTN MFDKMYPPEN