Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH9_2583 |
Symbol | |
ID | 5169874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH9 |
Kingdom | Bacteria |
Replicon accession | NC_009487 |
Strand | - |
Start bp | 2736862 |
End bp | 2738370 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640566968 |
Product | squalene synthase |
Protein accession | YP_001247936 |
Protein GI | 148268993 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.063443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATTG CAGTAATTGG TGCAGGTGTC ACAGGATTAG CAGCGGCAGC CCGTATTGCT TCTCAAGGTC ATGAAGTGAC GATATTTGAA AAAAATAATA ATGTAGGCGG GCGTATGAAT CAATTAAAGA AAGACGGCTT TACATTTGAT ATGGGTCCCA CAATTGTCAT GATGCCAGAT GTTTATAAAG ATGTTTTTAC AGCGTGTGGT AAAAATTATG AAGATTATAT TGAATTGAGA CAATTACGTT ATATTTACGA TGTGTATTTT GACCACGATG ATCGTATAAC GGTGCCTACA GATTTAGCTG AATTACAGCA AATGCTAGAA AGTATAGAAC CTGGTTCAAC GCATGGTTTT ATGTCCTTTT TAACGGATGT TTATAAAAAA TATGAAATTG CACGTCGCTA TTTCTTAGAA AGAACGTATC GCAAACCGAG TGACTTTTAT AATATGACGT CACTTGTGCA AGGTGCTAAG TTAAAAACGT TAAATCATGC AGATCAGCTA ATTGAACATT ATATTGATAA CGAAAAGATA CAAAAGCTTT TAGCGTTTCA AACGTTATAC ATAGGAATTG ATCCAAAACG AGGCCCGTCA CTATATTCAA TTATTCCTAT GATTGAAATG ATGTTTGGTG TGCATTTTAT TAAAGGCGGT ATGTATGGTA TGGCTCAAGG GCTAGCGCAA TTAAATAAAG ACTTAGGCGT TAATATTGAA CTAAATGCTG AAATTGAGCA AATTATTATT GATCCTAAAT TCAAACGGGC CGATGCGATA AAAGTGAATG GTGACATAAG AAAATTTGAT AAAATTTTAT GTACGGCTGA TTTCCCTAGT GTTGCGGAAT CATTAATGCC AGATTTTGCA CCTATTAAAA AGTATCCACC ACATAAAATT GCAGACTTAG ATTACTCTTG TTCAGCATTT TTAATGTATA TCGGTATAGA TATTGATGTG ACAGATCAAG TGAGACTTCA TAATGTTATT TTTTCAGATG ACTTTAGAGG CAATATTGAA GAAATATTTG AGGGACGTTT ATCATATGAT CCTTCTATTT ATGTGTATGT ACCAGCGGTC GCTGATAAAT CACTTGCGCC AGAAGGCAAA ACTGGTATTT ATGTGCTAAT GCCGACGCCG GAACTTAAAA CAGGTAGCGG AATCGATTGG TCAGATGAAG CTTTGACGCA ACAAATAAAG GAAATTATTT ATCGTAAATT AGCAACAATT GAAGTATTTG AAGATATAAA ATCGCATATT GTTTCAGAAA CAATCTTTAC GCCAAATGAT TTTGAGCAAA CGTATCATGC GAAATTTGGT TCGGCATTCG GTTTAATGCC AACTTTAGCG CAAAGTAATT ATTATCGTCC ACAAAATGTA TCGCGAGATT ATAAAGATTT ATATTTTGCA GGTGCAAGTA CGCACCCAGG TGCAGGCGTT CCTATTGTCT TAACAAGTGC GAAAATAACT GTAGACGAAA TGATTAAAGA TATTGAGCGG GGCGTATAA
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Protein sequence | MKIAVIGAGV TGLAAAARIA SQGHEVTIFE KNNNVGGRMN QLKKDGFTFD MGPTIVMMPD VYKDVFTACG KNYEDYIELR QLRYIYDVYF DHDDRITVPT DLAELQQMLE SIEPGSTHGF MSFLTDVYKK YEIARRYFLE RTYRKPSDFY NMTSLVQGAK LKTLNHADQL IEHYIDNEKI QKLLAFQTLY IGIDPKRGPS LYSIIPMIEM MFGVHFIKGG MYGMAQGLAQ LNKDLGVNIE LNAEIEQIII DPKFKRADAI KVNGDIRKFD KILCTADFPS VAESLMPDFA PIKKYPPHKI ADLDYSCSAF LMYIGIDIDV TDQVRLHNVI FSDDFRGNIE EIFEGRLSYD PSIYVYVPAV ADKSLAPEGK TGIYVLMPTP ELKTGSGIDW SDEALTQQIK EIIYRKLATI EVFEDIKSHI VSETIFTPND FEQTYHAKFG SAFGLMPTLA QSNYYRPQNV SRDYKDLYFA GASTHPGAGV PIVLTSAKIT VDEMIKDIER GV
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