Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH9_1728 |
Symbol | hemC |
ID | 5168003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH9 |
Kingdom | Bacteria |
Replicon accession | NC_009487 |
Strand | - |
Start bp | 1826785 |
End bp | 1827711 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640566071 |
Product | porphobilinogen deaminase |
Protein accession | YP_001247094 |
Protein GI | 148268151 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.446766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTAAAT TAGTCGTTGG CTCCAGAAGA AGTAAATTAG CTTTAACACA AAGCCAGCAA TTTATTAATA AATTAAAAGC TGTCGAGCCA AATCTAGAAA TTGAAATTAA AGAAATTGTC ACGAAAGGCG ATCGTATAGT AGATAAACAA TTGTCTAAAG TCGGAGGCAA AGGCTTATTT GTTAAAGAAA TACAACATGA ACTTTTTGAA AAAAATATCG ATATGGCAAT ACACTCGCTT AAAGACGTAC CAAGTGTAAT TCCGGAAGGT TTAACATTAG GTTGTATCCC TGATAGAGAA TTACCTTTTG ATGCGTATAT TTCTAAAACA CATACACCAC TATCCCAATT GCCAGAAGGC AGTATTATTG GTACTAGTTC ATTACGTCGT GGTGCACAAA TATTATCTAA GTATCCTAAT TTAGAGATTA AATGGATTAG AGGTAATATA GATACACGAT TAGAAAAGTT ACAAACTGAA GATTATGATG CGATTATTTT AGCTGCAGCT GGTTTAAGAA GAATGGGCTG GTCAGATGAT ATTGTAACAT CTTATCTTGA TAGAGATACA TTGTTACCTG CAATCGGACA AGGTGCTTTA GGGATAGAAT GTCGTAGTGA CGATGAAGAA CTATTAACAT TATTAAGCAA AGTACATAAT GATGAGGTTG CAAAATGTGT GACTGCTGAA CGAACGTTTT TAGCAGAAAT GGATGGTAGT TGTCAGGTGC CAATCGCAGG ATATGCTACA ATCTCAGATC AAAAAGAAAT CGAATTTACA GGTTTAATTA TGACCCCAGA TGGTAAAGAA CGATTTGAAT ATACAATGAA CGGAACAGAT CCGGTTGAGT TAGGCAAAAC AGTGAGTAAC AAATTAAAAG AGCAAGGTGC TTATGAAATT ATAAAACGCT TAAATGAACA ACATTAA
|
Protein sequence | MRKLVVGSRR SKLALTQSQQ FINKLKAVEP NLEIEIKEIV TKGDRIVDKQ LSKVGGKGLF VKEIQHELFE KNIDMAIHSL KDVPSVIPEG LTLGCIPDRE LPFDAYISKT HTPLSQLPEG SIIGTSSLRR GAQILSKYPN LEIKWIRGNI DTRLEKLQTE DYDAIILAAA GLRRMGWSDD IVTSYLDRDT LLPAIGQGAL GIECRSDDEE LLTLLSKVHN DEVAKCVTAE RTFLAEMDGS CQVPIAGYAT ISDQKEIEFT GLIMTPDGKE RFEYTMNGTD PVELGKTVSN KLKEQGAYEI IKRLNEQH
|
| |