Gene SaurJH9_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH9_1728 
SymbolhemC 
ID5168003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH9 
KingdomBacteria 
Replicon accessionNC_009487 
Strand
Start bp1826785 
End bp1827711 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content34% 
IMG OID640566071 
Productporphobilinogen deaminase 
Protein accessionYP_001247094 
Protein GI148268151 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0181] Porphobilinogen deaminase 
TIGRFAM ID[TIGR00212] porphobilinogen deaminase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.446766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAT TAGTCGTTGG CTCCAGAAGA AGTAAATTAG CTTTAACACA AAGCCAGCAA 
TTTATTAATA AATTAAAAGC TGTCGAGCCA AATCTAGAAA TTGAAATTAA AGAAATTGTC
ACGAAAGGCG ATCGTATAGT AGATAAACAA TTGTCTAAAG TCGGAGGCAA AGGCTTATTT
GTTAAAGAAA TACAACATGA ACTTTTTGAA AAAAATATCG ATATGGCAAT ACACTCGCTT
AAAGACGTAC CAAGTGTAAT TCCGGAAGGT TTAACATTAG GTTGTATCCC TGATAGAGAA
TTACCTTTTG ATGCGTATAT TTCTAAAACA CATACACCAC TATCCCAATT GCCAGAAGGC
AGTATTATTG GTACTAGTTC ATTACGTCGT GGTGCACAAA TATTATCTAA GTATCCTAAT
TTAGAGATTA AATGGATTAG AGGTAATATA GATACACGAT TAGAAAAGTT ACAAACTGAA
GATTATGATG CGATTATTTT AGCTGCAGCT GGTTTAAGAA GAATGGGCTG GTCAGATGAT
ATTGTAACAT CTTATCTTGA TAGAGATACA TTGTTACCTG CAATCGGACA AGGTGCTTTA
GGGATAGAAT GTCGTAGTGA CGATGAAGAA CTATTAACAT TATTAAGCAA AGTACATAAT
GATGAGGTTG CAAAATGTGT GACTGCTGAA CGAACGTTTT TAGCAGAAAT GGATGGTAGT
TGTCAGGTGC CAATCGCAGG ATATGCTACA ATCTCAGATC AAAAAGAAAT CGAATTTACA
GGTTTAATTA TGACCCCAGA TGGTAAAGAA CGATTTGAAT ATACAATGAA CGGAACAGAT
CCGGTTGAGT TAGGCAAAAC AGTGAGTAAC AAATTAAAAG AGCAAGGTGC TTATGAAATT
ATAAAACGCT TAAATGAACA ACATTAA
 
Protein sequence
MRKLVVGSRR SKLALTQSQQ FINKLKAVEP NLEIEIKEIV TKGDRIVDKQ LSKVGGKGLF 
VKEIQHELFE KNIDMAIHSL KDVPSVIPEG LTLGCIPDRE LPFDAYISKT HTPLSQLPEG
SIIGTSSLRR GAQILSKYPN LEIKWIRGNI DTRLEKLQTE DYDAIILAAA GLRRMGWSDD
IVTSYLDRDT LLPAIGQGAL GIECRSDDEE LLTLLSKVHN DEVAKCVTAE RTFLAEMDGS
CQVPIAGYAT ISDQKEIEFT GLIMTPDGKE RFEYTMNGTD PVELGKTVSN KLKEQGAYEI
IKRLNEQH