| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH9_1619 |
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| Symbol | |
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| ID | 5169618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus aureus subsp. aureus JH9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009487 |
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| Strand | - |
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| Start bp | 1720161 |
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| End bp | 1721267 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640565965 |
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| Product | RNA polymerase sigma factor RpoD |
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| Protein accession | YP_001246988 |
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| Protein GI | 148268045 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02393] RNA polymerase sigma factor RpoD, C-terminal domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000324281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGATA ACACAGTTAA AATTAAAAAA CAAACAATTG ATCCGACATT AACATTAGAA
GATGTTAAGA AGCAATTAAT TGAAAAAGGT AAAAAAGAGG GTCATTTAAG TCATGAAGAA
ATTGCTGAAA AACTTCAGAA TTTTGATATC GACTCTGATC AAATGGATGA TTTCTTTGAT
CAATTAAATG ATAATGATAT TTCACTAGTT AATGAAAAAG ATAGTTCAGA TACTGACGAG
AAACTGAATC CAAGTGATCT TAGTGCCCCT CCAGGTGTTA AAATAAATGA CCCAGTTCGT
ATGTACCTTA AAGAAATTGG GCGTGTTAAC TTATTAAGTG CACAAGAAGA AATCGAATTA
GCCAAACGTA TTGAACAAGG TGATGAAGTA GCAAAATCAA GACTTGCAGA AGCGAACTTA
CGTTTAGTTG TAAGTATTGC TAAAAGATAC GTAGGTCGTG GTATGTTATT CCTTGATTTA
ATCCAAGAAG GTAATATGGG TCTTATTAAA GCTGTTGAAA AATTTGACTT TAACAAAGGA
TTTAAGTTTT CAACATATGC AACATGGTGG ATTAGACAAG CAATCACTCG TGCAATTGCT
GACCAAGCAC GTACGATTCG TATCCCTGTG CATATGGTAG AAACAATTAA TAAATTAATT
CGTGTTCAAC GTCAATTATT ACAGGACTTA GGTCGAGATC CAGCACCAGA AGAAATTGGT
GAAGAAATGG ATTTACCAGC AGAAAAAGTT CGTGAAATTT TAAAAATTGC GCAAGAACCT
GTTTCATTAG AAACACCAAT TGGTGAAGAA GATGATAGTC ATTTAGGAGA CTTTATTGAG
GATCAGGAAG CACAAAGTCC TTCAGATCAT GCTGCTTATG AATTATTAAA AGAGCAATTA
GAAGATGTGC TTGATACATT AACTGATAGA GAAGAAAATG TATTACGATT AAGATTTGGT
CTTGATGACG GCAGAACAAG AACACTTGAA GAAGTTGGTA AAGTTTTCGG TGTTACACGT
GAACGTATTC GACAAATTGA AGCAAAAGCA CTTAGAAAAT TAAGACATCC AAGTCGTAGT
AAACGTTTGA AAGACTTTAT GGATTAA
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| Protein sequence | MSDNTVKIKK QTIDPTLTLE DVKKQLIEKG KKEGHLSHEE IAEKLQNFDI DSDQMDDFFD
QLNDNDISLV NEKDSSDTDE KLNPSDLSAP PGVKINDPVR MYLKEIGRVN LLSAQEEIEL
AKRIEQGDEV AKSRLAEANL RLVVSIAKRY VGRGMLFLDL IQEGNMGLIK AVEKFDFNKG
FKFSTYATWW IRQAITRAIA DQARTIRIPV HMVETINKLI RVQRQLLQDL GRDPAPEEIG
EEMDLPAEKV REILKIAQEP VSLETPIGEE DDSHLGDFIE DQEAQSPSDH AAYELLKEQL
EDVLDTLTDR EENVLRLRFG LDDGRTRTLE EVGKVFGVTR ERIRQIEAKA LRKLRHPSRS
KRLKDFMD
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