| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH9_1080 |
|---|
| Symbol | |
|---|
| ID | 5167256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009487 |
|---|
| Strand | + |
|---|
| Start bp | 1119739 |
|---|
| End bp | 1121184 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640565430 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase |
|---|
| Protein accession | YP_001246457 |
|---|
| Protein GI | 148267514 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.063443 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCAA AATTAACTAA AAAAGATTTT ATAGAGTGGT TGAAAACTTC TGAGGGAAAA
CAATTCAATG TGGACTTATG GTATGGATTT CAATGCTTTG ATTATGCCAA TGCTGGTTGG
AAAGTTTTGT TTGGATTACT TCTGAAAGGT TTAGGTGCAA AAGATATACC ATTTGCAAAC
AATTTCGATG GACTAGCTAC TGTATACCAA AATACACCGG ACTTTTTGGC ACAACCCGGC
GACATGGTTG TATTCGGTAG CAATTACGGT GCAGGATACG GACACGTAGC ATGGGTAATT
GAAGCAACTT TAGATTATAT CATTGTATAT GAGCAGAATT GGCTAGGCGG TGGCTGGACT
GACGGAATCG AACAACCCGG CTGGGGTTGG GAAAAAGTTA CAAGACGACA ACATGCTTAC
GATTTCCCTA TGTGGTTTAT CCGCCCGAAC TTCAAAAGCG AAATAACACC ACGATCAGTT
CAATCTCCTA CACAAGCACC TAAAAAAGAA ACAGCAATTC CACAACCTAA AGCGGTAGAA
CTTAAAATTA TCAAGGATGT GGTTAAAGGT TATGACCTTC CTAAACGTGG TGGTAATCCT
AAAGGTATTG TCATTCATAA TGACGCAGGA AGCAAAGGGG CGACAGCGGA AGCTTATCGC
AACGGATTAG TTAACGCACC TTTATCGAGA TTAGAGGCAG GTATTGCACA TAGTTATGTA
TCAGGTAACA CAGTGTGGCA AGCTTTAGAT GAATCACAAG TAGGTTGGCA TACTGCTAAC
CAATTAGGCA ATAAATATTA TTACGGTATT GAAGTGTGTC AATCAATGGG TGCAGATAAC
GCGACATTCT TAAAAAATGA ACAGGCAACT TTCCAAGAAT GCGCTAGATT GTTAAAAAAA
TGGGGTTTAC CAGCAAACAG GAACACAATC AGATTACACA ACGAATTCAC TTCAACATCA
TGTCCACACA GAAGCTCAGT ATTACACACT GGTTTTGACC CAGTAACTCG CGGTCTATTG
CCAGAAGACA AGCGGTTGCA ACTTAAAGAC TACTTTATCA AGCAGATTAG GGCGTACATG
GATGGTAAAA TACCGGTTGC CACTGTCTCT AATGAGTCAA GCGCTTCAAG TAATACAGTT
AAACCAGTTG CAAGTGCATG GAAACGTAAT AAATATGGTA CTTACTACAT GGAAGAAAGT
GCTAGATTCA CAAACGGCAA TCAACCAATC ACAGTAAGAA AAGTGGGGCC ATTCTTATCT
TGTCCAGTGG GTTATCAGTT CCAACCTGGT GGGTATTGTG ATTATACAGA AGTGATGTTA
CAAGATGGTC ATGTTTGGGT AGGATATACA TGGGAGGGGC AACGTTATTA CTTGCCTATT
AGAACATGGA ATGGTTCTGC CCCACCTAAT CAGATATTAG GTGACTTATG GGGAGAAATC
AGTTAG
|
|---|
| Protein sequence | MQAKLTKKDF IEWLKTSEGK QFNVDLWYGF QCFDYANAGW KVLFGLLLKG LGAKDIPFAN
NFDGLATVYQ NTPDFLAQPG DMVVFGSNYG AGYGHVAWVI EATLDYIIVY EQNWLGGGWT
DGIEQPGWGW EKVTRRQHAY DFPMWFIRPN FKSEITPRSV QSPTQAPKKE TAIPQPKAVE
LKIIKDVVKG YDLPKRGGNP KGIVIHNDAG SKGATAEAYR NGLVNAPLSR LEAGIAHSYV
SGNTVWQALD ESQVGWHTAN QLGNKYYYGI EVCQSMGADN ATFLKNEQAT FQECARLLKK
WGLPANRNTI RLHNEFTSTS CPHRSSVLHT GFDPVTRGLL PEDKRLQLKD YFIKQIRAYM
DGKIPVATVS NESSASSNTV KPVASAWKRN KYGTYYMEES ARFTNGNQPI TVRKVGPFLS
CPVGYQFQPG GYCDYTEVML QDGHVWVGYT WEGQRYYLPI RTWNGSAPPN QILGDLWGEI
S
|
|---|
| |