Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH9_0024 |
Symbol | |
ID | 5168509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH9 |
Kingdom | Bacteria |
Replicon accession | NC_009487 |
Strand | + |
Start bp | 33747 |
End bp | 34226 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640564361 |
Product | rRNA large subunit methyltransferase |
Protein accession | YP_001245414 |
Protein GI | 148266471 |
COG category | [S] Function unknown |
COG ID | [COG1576] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000337367 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCA CCATTTTAGC TGTAGGGAAA CTAAAAGAGA AATATTGGAA GCAAGCCATA GCAGAATATG AAAAACGTTT AGGCCCATAC ACCAAGATAG ACATCATAGA AGTTCCAGAC GAAAAAGCAC CAGAAAATAT GAGCGACAAA GAAATTGAGC AAGTAAAAGA AAAAGAAGGC CAACGAATAC TAGCCAAAAT TAAACCACAA TCCACAGTCA TTACATTAGA AATACAAGGA AAGATGCTAT CTTCCGAAGG ATTGGCCCAA GAATTGAACC AACGCATGAC CCAAGGGCAA AGCGACTTTG TATTCGTCAT TGGCGGATCA AACGGCCTGC ACAAGGACGT CTTACAACGC AGTAACTACG CACTATCATT CAGCAAAATG ACATTCCCAC ATCAAATGAT GCGGGTTGTG TTAATTGAGC AAGTGTATAG AGCATTTAAG ATTATGCGTG GAGAAGCATA TCATAAATGA
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Protein sequence | MKITILAVGK LKEKYWKQAI AEYEKRLGPY TKIDIIEVPD EKAPENMSDK EIEQVKEKEG QRILAKIKPQ STVITLEIQG KMLSSEGLAQ ELNQRMTQGQ SDFVFVIGGS NGLHKDVLQR SNYALSFSKM TFPHQMMRVV LIEQVYRAFK IMRGEAYHK
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