| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_2637 |
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| Symbol | |
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| ID | 5317627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus aureus subsp. aureus JH1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009632 |
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| Strand | - |
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| Start bp | 2736738 |
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| End bp | 2738246 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640780747 |
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| Product | squalene synthase |
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| Protein accession | YP_001317747 |
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| Protein GI | 150395072 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.359925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATTG CAGTAATTGG TGCAGGTGTC ACAGGATTAG CAGCGGCAGC CCGTATTGCT
TCTCAAGGTC ATGAAGTGAC GATATTTGAA AAAAATAATA ATGTAGGCGG GCGTATGAAT
CAATTAAAGA AAGACGGCTT TACATTTGAT ATGGGTCCCA CAATTGTCAT GATGCCAGAT
GTTTATAAAG ATGTTTTTAC AGCGTGTGGT AAAAATTATG AAGATTATAT TGAATTGAGA
CAATTACGTT ATATTTACGA TGTGTATTTT GACCACGATG ATCGTATAAC GGTGCCTACA
GATTTAGCTG AATTACAGCA AATGCTAGAA AGTATAGAAC CTGGTTCAAC GCATGGTTTT
ATGTCCTTTT TAACGGATGT TTATAAAAAA TATGAAATTG CACGTCGCTA TTTCTTAGAA
AGAACGTATC GCAAACCGAG TGACTTTTAT AATATGACGT CACTTGTGCA AGGTGCTAAG
TTAAAAACGT TAAATCATGC AGATCAGCTA ATTGAACATT ATATTGATAA CGAAAAGATA
CAAAAGCTTT TAGCGTTTCA AACGTTATAC ATAGGAATTG ATCCAAAACG AGGCCCGTCA
CTATATTCAA TTATTCCTAT GATTGAAATG ATGTTTGGTG TGCATTTTAT TAAAGGCGGT
ATGTATGGTA TGGCTCAAGG GCTAGCGCAA TTAAATAAAG ACTTAGGCGT TAATATTGAA
CTAAATGCTG AAATTGAGCA AATTATTATT GATCCTAAAT TCAAACGGGC CGATGCGATA
AAAGTGAATG GTGACATAAG AAAATTTGAT AAAATTTTAT GTACGGCTGA TTTCCCTAGT
GTTGCGGAAT CATTAATGCC AGATTTTGCA CCTATTAAAA AGTATCCACC ACATAAAATT
GCAGACTTAG ATTACTCTTG TTCAGCATTT TTAATGTATA TCGGTATAGA TATTGATGTG
ACAGATCAAG TGAGACTTCA TAATGTTATT TTTTCAGATG ACTTTAGAGG CAATATTGAA
GAAATATTTG AGGGACGTTT ATCATATGAT CCTTCTATTT ATGTGTATGT ACCAGCGGTC
GCTGATAAAT CACTTGCGCC AGAAGGCAAA ACTGGTATTT ATGTGCTAAT GCCGACGCCG
GAACTTAAAA CAGGTAGCGG AATCGATTGG TCAGATGAAG CTTTGACGCA ACAAATAAAG
GAAATTATTT ATCGTAAATT AGCAACAATT GAAGTATTTG AAGATATAAA ATCGCATATT
GTTTCAGAAA CAATCTTTAC GCCAAATGAT TTTGAGCAAA CGTATCATGC GAAATTTGGT
TCGGCATTCG GTTTAATGCC AACTTTAGCG CAAAGTAATT ATTATCGTCC ACAAAATGTA
TCGCGAGATT ATAAAGATTT ATATTTTGCA GGTGCAAGTA CGCACCCAGG TGCAGGCGTT
CCTATTGTCT TAACAAGTGC GAAAATAACT GTAGACGAAA TGATTAAAGA TATTGAGCGG
GGCGTATAA
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| Protein sequence | MKIAVIGAGV TGLAAAARIA SQGHEVTIFE KNNNVGGRMN QLKKDGFTFD MGPTIVMMPD
VYKDVFTACG KNYEDYIELR QLRYIYDVYF DHDDRITVPT DLAELQQMLE SIEPGSTHGF
MSFLTDVYKK YEIARRYFLE RTYRKPSDFY NMTSLVQGAK LKTLNHADQL IEHYIDNEKI
QKLLAFQTLY IGIDPKRGPS LYSIIPMIEM MFGVHFIKGG MYGMAQGLAQ LNKDLGVNIE
LNAEIEQIII DPKFKRADAI KVNGDIRKFD KILCTADFPS VAESLMPDFA PIKKYPPHKI
ADLDYSCSAF LMYIGIDIDV TDQVRLHNVI FSDDFRGNIE EIFEGRLSYD PSIYVYVPAV
ADKSLAPEGK TGIYVLMPTP ELKTGSGIDW SDEALTQQIK EIIYRKLATI EVFEDIKSHI
VSETIFTPND FEQTYHAKFG SAFGLMPTLA QSNYYRPQNV SRDYKDLYFA GASTHPGAGV
PIVLTSAKIT VDEMIKDIER GV
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