| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_1946 |
|---|
| Symbol | |
|---|
| ID | 5315517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | - |
|---|
| Start bp | 2035087 |
|---|
| End bp | 2036544 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640780022 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001317067 |
|---|
| Protein GI | 150394392 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000538211 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTGTT TAATTAGGTT TATATTAGTA TTAGGGTTGT TAATTAGCAG TGCTATGGTG
TATATCAATC CCACAGCACA TGCTGAACAA GATCAAACAT GGGAGAAGAT TAAAGAACGC
GGTGAACTTA GAGTGGGTCT TTCTGCAGAT TATGCACCAA TGGAATTTGA GCATACAGTT
AATGGTAAGA CTGAGTATGC AGGTGTAGAT ATTGATTTAG CTAAAAAAAT TGCGAAAGAT
AATAATTTAA AATTAAAAAT CGTCAATATG TCATTTGATA GTTTGTTAGG AGCTCTTAAA
ACTGGAAAAA TTGATATTAT TATTTCCGGA ATGACTTCAA CGCCTGAACG TAAGAAGCAA
GTTGATTTTT CAGATTCATA TATGATGACT AAAAATATCA TGCTTGTAAA GAAAGATAAA
GTTAATGAAT ATAAAGATAT CAAAGACTTT AATAATAAAA AAGTAGGGGC ACAAAAGGGA
ACTGAACAAG AAAAAATCGC TCAAACCGAA ATTGAAAATG CATCTATTAC TTCATTAAGC
CGTTTACCAG ACGTTATATT AGCATTGAAA AGTGGAAAGG TTGAAGGTGC TGTAGTTGAA
AAACCTGTAG CAGAAGCATA TTTAAAACAA AATCCTAAAT TAGGAATTTC CAATGTGAAA
TTTAATGAAG AAGAAAAAGA TACAGTGATA GCTGTGCCAA AAGATTCACC AAAATTATTG
TCACAAATTA ATAAAACGAT TAAAGAGGTT AAAGATAAAG GATTAATCGA TAAATATATG
ACTAATGCTG CAAATGCGAT GAATGATGAC AGTGGTTTTA TTTCTAAGTA TGGTAGTTTT
TTCTTGAAAG GAATTAAGAT TACAATATTA ATTTCACTTA TCGGTGTTGC ATTAGGTTCT
ATTTTAGGTG CATTCGTTGC GTTAATGAAA TTAAGTAAAA TAAAAATTAT TTCATGGATT
GCTTCTATCT ATATCGAAAT ATTAAGAGGA ACACCAATGT TAGTTCAAGT ATTTATCGTA
TTCTTTGGTA TAACTGCTGC ATTAGGACTA GACATTTCAG CTCTTGTTTG TGGAACAATT
GCATTAGTTA TTAATTCCTC AGCTTACATT GCTGAAATTA TTCGTGCAGG TATAAATGCT
GTTGATAAAG GACAAATGGA AGCCGCACGT AGTCTAGGTT TGAATTATAG ACAAACGATG
AAAAGTGTAA TTATGCCACA AGCAATTAAA AATATTTTAC CAGCTTTAGG TAATGAATTT
GTCACTTTAA TTAAAGAATC ATCTATTGTG TCAACAATTG GAGTTGGCGA AATTATGTTT
AATGCACAAG TGGTTCAAGG TATTTCATTT GACCCATTCA CACCATTACT AGTGGCAGCA
GCATTATACT TTGTCTTAAC ATTTGTACTT ACACGCATTA TGAACATGAT TGAAGGGAGA
TTGAATGCCA GTGATTAA
|
|---|
| Protein sequence | MKCLIRFILV LGLLISSAMV YINPTAHAEQ DQTWEKIKER GELRVGLSAD YAPMEFEHTV
NGKTEYAGVD IDLAKKIAKD NNLKLKIVNM SFDSLLGALK TGKIDIIISG MTSTPERKKQ
VDFSDSYMMT KNIMLVKKDK VNEYKDIKDF NNKKVGAQKG TEQEKIAQTE IENASITSLS
RLPDVILALK SGKVEGAVVE KPVAEAYLKQ NPKLGISNVK FNEEEKDTVI AVPKDSPKLL
SQINKTIKEV KDKGLIDKYM TNAANAMNDD SGFISKYGSF FLKGIKITIL ISLIGVALGS
ILGAFVALMK LSKIKIISWI ASIYIEILRG TPMLVQVFIV FFGITAALGL DISALVCGTI
ALVINSSAYI AEIIRAGINA VDKGQMEAAR SLGLNYRQTM KSVIMPQAIK NILPALGNEF
VTLIKESSIV STIGVGEIMF NAQVVQGISF DPFTPLLVAA ALYFVLTFVL TRIMNMIEGR
LNASD
|
|---|
| |