Gene SaurJH1_1537 details

Gene Information

• Locus tag: SaurJH1_1537
• Symbol: recU
• ID: 5316256
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus aureus subsp. aureus JH1
• Kingdom: Bacteria
• Replicon accession: NC_009632
• Strand: +
• Start bp: 1610687
• End bp: 1611313
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 640779620
• Product: Holliday junction-specific endonuclease
• Protein accession: YP_001316673
• Protein GI: 150393998
• COG category: [R] General function prediction only
• COG ID: [COG3331] Penicillin-binding protein-related factor A, putative recombinase
• TIGRFAM ID: [TIGR00648] recombination protein U

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.873676
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTATC CAAATGGTAA ACCATATCGT AAAAATAGTG CTATAGACGG AGGGAAAAAG 
ACCGCTGCCT TTAGTAATAT TGAGTATGGT GGACGTGGTA TGTCACTTGA AAAAGATATC 
GAACATTCAA ATACGTTTTA TCTTAAAAGC GACATTGCAG TTATTCACAA AAAGCCTACG 
CCAGTACAAA TAGTTAATGT CAACTATCCT AAGCGGAGTA AAGCTGTGAT TAACGAAGCT 
TATTTTCGTA CACCTTCAAC AACTGATTAC AACGGCGTTT ATCAAGGTTA TTATATTGAT 
TTTGAAGCAA AGGAAACTAA AAACAAGACG TCCTTTCCTT TAAATAATAT TCATGACCAT 
CAAGTCGAAC ATATGAAAAA TGCATATCAA CAAAAAGGTA TTGTGTTTTT AATGATTCGT 
TTTAAAACGC TAGATGAAGT TTATCTTTTA CCCTATTCAA AATTCGAAGT ATTTTGGAAG 
AGATATAAAG ATAATATTAA AAAGTCTATA ACAGTTGATG AAATACGAAA AAATGGTTAC 
CATATTCCTT ATCAGTATCA ACCAAGATTA GACTATCTAA AAGCAGTTGA TAAGTTGATA 
TTAGATGAAA GTGAGGACCG CGTATGA 

 

Protein sequence

MNYPNGKPYR KNSAIDGGKK TAAFSNIEYG GRGMSLEKDI EHSNTFYLKS DIAVIHKKPT 
PVQIVNVNYP KRSKAVINEA YFRTPSTTDY NGVYQGYYID FEAKETKNKT SFPLNNIHDH 
QVEHMKNAYQ QKGIVFLMIR FKTLDEVYLL PYSKFEVFWK RYKDNIKKSI TVDEIRKNGY 
HIPYQYQPRL DYLKAVDKLI LDESEDRV