Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_1214 |
Symbol | |
ID | 5316613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | + |
Start bp | 1234267 |
End bp | 1235145 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640779301 |
Product | periplasmic binding protein |
Protein accession | YP_001316355 |
Protein GI | 150393680 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | [TIGR03659] heme ABC transporter, heme-binding protein isdE |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0039818 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGAATCA TAAAGTATTT AACCATTTTA GTGATAAGCG TCGTTATCTT AACCAGCTGT CAATCTTCCA GTTCTCAAGA ATCAACTAAA TCCGGCGAAT TCAGAATCGT ACCAACAACT GTTGCATTGA CAATGACATT GGACAAATTG GATTTACCAA TTGTCGGCAA ACCCACGTCA TATAAGACAT TGCCTAATCG TTATAAAGAT GTACCGGAAA TTGGTCAACC AATGGAGCCG AATGTTGAAG CTGTTAAAAA GTTAAAACCA ACACATGTTT TGAGTGTGTC AACGATTAAA GATGAAATGC AACCATTTTA CAAACAATTA AATATGAAAG GCTACTTTTA TGATTTTGAT AGTTTAAAAG GGATGCAAAA GTCGATTACA CAATTAGGTG ATCAATTTAA TCGTAAAGCA CAAGCAAAAG AATTAAATGA CCATTTAAAT TCTGTAAAGC AAAAAATTGA AAATAAAGCA GCTAAACAAA AGAAACATCC CAAAGTATTA ATATTAATGG GTGTACCGGG TAGCTATTTA GTAGCAACTG ATAAATCATA TATTGGTGAT TTAGTTAAAA TAGCAGGTGG AGAAAATGTT ATTAAAGTGA AAGATCGTCA ATATATTTCG TCTAATACTG AAAATTTGTT GAATATCAAT CCAGATATTA TTTTACGATT ACCACACGGA ATGCCTGAAG AAGTTAAGAA AATGTTTCAA AAAGAATTTA AACAAAATGA TATTTGGAAA CATTTTAAAG CTGTGAAAAA TAATCATGTT TATGACTTAG AGGAAGTGCC ATTCGGTATT ACAGCAAATG TTGATGCTGA TAAGGCAATG ACTCAATTAT ATGATTTATT TTATAAGGAT AAAAAATAG
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Protein sequence | MRIIKYLTIL VISVVILTSC QSSSSQESTK SGEFRIVPTT VALTMTLDKL DLPIVGKPTS YKTLPNRYKD VPEIGQPMEP NVEAVKKLKP THVLSVSTIK DEMQPFYKQL NMKGYFYDFD SLKGMQKSIT QLGDQFNRKA QAKELNDHLN SVKQKIENKA AKQKKHPKVL ILMGVPGSYL VATDKSYIGD LVKIAGGENV IKVKDRQYIS SNTENLLNIN PDIILRLPHG MPEEVKKMFQ KEFKQNDIWK HFKAVKNNHV YDLEEVPFGI TANVDADKAM TQLYDLFYKD KK
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