Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SaurJH1_0787 |
Symbol | |
ID | 5315779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus aureus subsp. aureus JH1 |
Kingdom | Bacteria |
Replicon accession | NC_009632 |
Strand | - |
Start bp | 840918 |
End bp | 841988 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640778872 |
Product | diguanylate cyclase |
Protein accession | YP_001315930 |
Protein GI | 150393255 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0010071 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGAAG CATTTATATA CAATATATCT GTTATAGTCG CTGGAATCTA TTTATTCCAT CGCTTACAGT ATTCAGAAAA CAAACGTATG GTTTTTTCTA AGGCTTATGT CACTGTTTTA ATGACAATCG TATCATTATT ATTATCTGTC TACCCTATCC CTTATCGTGA AGATTATTTA ATTCACTTAA CATTCGTTCC TTTATTGTTT TTAGGTAGAT TTACAAATAT GGTCTATACA TTATCTGCCA CAGTAATTGT AGCAATTGTT GAAATTGTAG TATTTAACAA CTCGATTATG TACGGTGTTA CGTTGATTGT TATTGCTGCA GTAACAAGTG CTATTGGACC ATTTTTAAAA CAAAATGATG TGCTATCATT ATTAATACTT AATGTTGTTA CAATAATCAT TTTATTTGGT GTCGCGTTAG TGAGTCCTAT TTATACACTA TCGGAAGTTA TCATTTTAAT ACCAATTTCA TTAATTATCA CTTTAGCTTC AGCGATAACA TTTGTCGATA TTTGGCATTT CTTCTCACTC GTAAATCGTT ATGAAAACGA AGATAAATAT GATTACTTAA CAGGCTTAGG TAATGTAAAA GAATTTGATA GACATTTAAA TGAAATTTCA CGAAAAGCTG AAAAAGAACA TCAAAGTATC GCTTTATTAT TAATCGATAT CGATGGATTT AAAGATGTCA ATGATACCTA CTCACACAAA TCAGGTGATG CTGTATTAAA ACAAATGTCT CAATTACTTA AAAACTATGT GCCGAATCAA TTTAAAATTT TTAGAAATGG TGGCGAAGAG TTCTCAGTTG TCATTCACAA TTATTCACTT GATCAAAGTG TTAAATTAGC TGAAAATATT CGTTCGGGTG TTGAAAAATC ATCATTCCAT TTACCAAACA AAGAAGTTAT TAAATTGTCA GTGTCTATCG GTGTTGGTTA TTTAACAGAT GACGATCCAA AATCACAGCG TAAAGTGTTT AAAGATGCAG ACGATATGGT GCATGTAGCC AAAAATCAAG GGCGAAACAA AGTAATGTTT AACCCTATTA TCAATTTATA A
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Protein sequence | MFEAFIYNIS VIVAGIYLFH RLQYSENKRM VFSKAYVTVL MTIVSLLLSV YPIPYREDYL IHLTFVPLLF LGRFTNMVYT LSATVIVAIV EIVVFNNSIM YGVTLIVIAA VTSAIGPFLK QNDVLSLLIL NVVTIIILFG VALVSPIYTL SEVIILIPIS LIITLASAIT FVDIWHFFSL VNRYENEDKY DYLTGLGNVK EFDRHLNEIS RKAEKEHQSI ALLLIDIDGF KDVNDTYSHK SGDAVLKQMS QLLKNYVPNQ FKIFRNGGEE FSVVIHNYSL DQSVKLAENI RSGVEKSSFH LPNKEVIKLS VSIGVGYLTD DDPKSQRKVF KDADDMVHVA KNQGRNKVMF NPIINL
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