| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SaurJH1_0600 |
|---|
| Symbol | |
|---|
| ID | 5315399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus aureus subsp. aureus JH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009632 |
|---|
| Strand | + |
|---|
| Start bp | 653285 |
|---|
| End bp | 656746 |
|---|
| Gene Length | 3462 bp |
|---|
| Protein Length | 1153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640778687 |
|---|
| Product | cell wall anchor domain-containing protein |
|---|
| Protein accession | YP_001315745 |
|---|
| Protein GI | 150393070 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5644] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR01168] Gram-positive signal peptide, YSIRK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAACA GGGATAATAA AAAGGCAATA ACAAAAAAGG GTATGATTTC AAATCGCTTA
AACAAATTTT CGATTAGAAA GTATACTGTA GGAACTGCAT CGATTTTAGT AGGTACGACA
TTGATTTTTG GTCTAGGGAA CCAAGAAGCT AAAGCTGCTG AAAACACTAG TACAGAAAAT
GCGAAACAAG ATGATGCAAC GACTAGTGAT AATAAAGAAG TAGTGTCGGA AACTGAAAAT
AATTCGACAA CAGAAAATGA TTCAACAAAT CCAATTAAGA AAGAAACAAA TACTGATTCA
CAACCAGAAG CTAAAGAAGA ATCAACTACA TCAAGTACTC AACAACAGCA AAATAACGTT
ACAGCTACAA CTGAAACTAA GCCTCAAAAC ATTGAAAAAG AAAATGTTAA ACCTTCAACT
GATAAAACTG CGACAGAAGA TACATCTGTT ATTTTAGAAG AGAAGAAAGC ACCAAATTAT
ACAAATAACG ATGTAACTAC AAAACCATCT ACAAGTGAAA TTCAAACAAA ACCAACTACA
CCTCAAGAAT CTACAAATAT TGAAAATTCA CAACCGCAAC CAACGCCTTC AAAAGTAGAC
AATCAAGTTA CAGATGCAAC TAATCCAAAA GAACCAGTAA ATGTGTCAAA AGAAGAACTT
AAAAATAATC CTGAGAAATT AAAAGAATTA GTTAGAAATG ATAACAATAC AGATCGTTCA
ACTAAACCAG TTGCTACAGC TCCAACAAGT GTTGCACCAA AACGATTAAA TGCGAAAATG
CGTTTTGCAG TTGCACAACC AGCAGCAGTT GCTTCAAATA ATGTAAATGA CTTAATTACA
GTTACGAAAC AGACGATCAA AGTTGGCGAT GGTAAAGATA ATGTGGCAGC AGCGCATGAC
GGTAAAGATA TTGAATATGA TACAGAGTTT ACAATTGACA ATAAAGTCAA AAAAGGCGAT
ACAATGACGA TTAATTATGA TAAGAATGTA ATTCCTTCGG ATTTAACAGA TAAAAATGAT
CCTATCGATA TTACTGATCC ATCAGGAGAG GTCATTGCCA AAGGAACATT TGATAAAGCG
ACTAAGCAAA TCACATATAC ATTTACAGAT TATGTAGATA AATATGAAGA TATAAAAGCA
CGTTTAACTT TATACTCATA TATTGATAAG CAAGCAGTAC CTAATGAAAC TAGTTTGAAT
TTAACGTTTG CAACAGCAGG TAAAGAAACT AGCCAAAACG TTTCTGTTGA TTATCAAGAC
CCAATGGTTC ATGGTGATTC AAACATTCAA TCTATCTTTA CAAAGTTAGA TGAAAACAAA
CAAACTATTG AACAACAAAT TTATGTTAAT CCTTTGAAAA AAACAGCAAC TAACACTAAA
GTTGATATAG CTGGTAGTCA AGTAGATGAT TATGGAAATA TTAAACTAGG AAATGGTAGT
ACCATTATTG ACCAAAATAC AGAAATAAAA GTTTATAAAG TTAACCCTAA TCAACAATTG
CCTCAAAGTA ATAGAATCTA TGATTTTAGT CAATACGAAG ATGTAACAAG TCAATTTGAT
AATAAAAAAT CATTTAGTAA TAATGTAGCA ACATTGGATT TTGGTGATAT TAATTCAGCC
TATATTATCA AAGTTGTTAG TAAATATACA CCTACATCAG ATGGCGAACT AGATATTGCT
CAAGGTACTA GTATGAGAAC AACTGATAAA TATGGTTATT ATAATTATGC AGGATATTCA
AACTTCATCG TAACTTCTAA TGACACTGGC GGTGGCGACG GTACTGTTAA ACCTGAAGAA
AAGTTATACA AAATTGGTGA CTATGTATGG GAAGACGTTG ATAAAGACGG TGTCCAAGGT
ACAGATTCGA AAGAAAAGCC AATGGCAAAC GTTTTAGTTA CATTAACTTA CCCGGACGGT
ACTACAAAAT CAGTAAGAAC AGATGCTAAC GGTCATTATG AATTCGGTGG TTTGAAAGAC
GGAGAAACTT ATACAGTTAA ATTCGAAACG CCAGCTGGAT ATCTTCCAAC AAAAGTAAAT
GGAACAACTG ATGGTGAAAA AGACTCAAAT GGTAGTTCTA TAACTGTTAA AATTAATGGT
AAAGATGATA TGTCTTTAGA CACTGGTTTT TATAAAGAAC CTAAATATAA TCTTGGTGAC
TATGTATGGG AAGATACAAA TAAAGATGGT ATCCAAGATG CTAATGAACC TGGTATCAAA
GATGTTAAGG TTACATTAAA AGATAGTACT GGAAAAGTTA TTGGTACAAC TACTACTGAT
GCCTCGGGTA AATATAAATT TACAGATTTA GATAATGGTA ACTATACAGT AGAATTTGAA
ACACCAGCAG GTTACACGCC AACGGTTAAA AATACTACAG CTGAAGATAA AGATTCTAAT
GGTTTAACAA CAACAGGTGT CATTAAAGAT GCAGATAATA TGACATTAGA CAGTGGTTTC
TATAAAACAC CAAAATACAG TTTAGGTGAT TATGTTTGGT ACGACAGTAA TAAAGACGGT
AAACAAGATT CAACTGAAAA AGGTATCAAA GATGTTAAAG TTACTTTATT AAATGAAAAA
GGCGAAGTAA TTGGAACAAC TAAAACAGAT GAAAATGGTA AATATCGTTT CGATAATTTA
GATAGCGGTA AATACAAAGT TATTTTTGAA AAGCCTGCTG GCTTAACACA AACAGTTACA
AATACAACTG AAGATGATAA AGATGCCGAT GGTGGCGAAG TTGACGTAAC AATTACGGAT
CATGATGATT TCACACTTGA TAACGGATAC TTCGAAGAAG ATACATCAGA CAGTGATTCA
GACTCAGACA GTGATTCAGA CTCAGACAGC GACTCAGATT CAGACAGTGA TTCAGACTCA
GATAGCGATT CAGATTCAGA CAGCGACTCA GACTCAGATA GCGACTCAGA CTCAGACAGC
GACTCAGACT CAGATAGCGA CTCAGATTCG GACAGCGATT CAGACTCAGA TAGCGACTCA
GATTCAGACA GCGATTCAGA CTCAGATAGC GACTCAGATT CAAACAGTGA CTCAGACTCA
GATAGCGACT CAGACTCAGA CAGTGACTCA GACTCAGACA GCGATTCAGA TTCAGATAGC
GACTCAGATT CGGACAGTGA TTCAGACTCA GATAGCGACT CAGATTCAGA CAGCGACTCA
GACTCAGATA GCGACTCAGA TTCGGACAGC GACTCAGACT CAGATAGCGA CTCAGACTCA
GACAGTGATT CAGACTCAGA TAGCGATTCG GACTCGGATG CAGGAAAACA TACACCTGTT
AAACCAATGA GTACTACTAA AGACCATCAC AATAAAGCAA AAGCATTACC AGAAACAGGT
AGTGAAAATA ACGGCTCAAA TAACGCAACG TTATTTGGTG GATTATTTGC AGCATTAGGT
TCATTATTGT TATTCGGTCG TCGCAAAAAA CAAAACAAAT AA
|
|---|
| Protein sequence | MINRDNKKAI TKKGMISNRL NKFSIRKYTV GTASILVGTT LIFGLGNQEA KAAENTSTEN
AKQDDATTSD NKEVVSETEN NSTTENDSTN PIKKETNTDS QPEAKEESTT SSTQQQQNNV
TATTETKPQN IEKENVKPST DKTATEDTSV ILEEKKAPNY TNNDVTTKPS TSEIQTKPTT
PQESTNIENS QPQPTPSKVD NQVTDATNPK EPVNVSKEEL KNNPEKLKEL VRNDNNTDRS
TKPVATAPTS VAPKRLNAKM RFAVAQPAAV ASNNVNDLIT VTKQTIKVGD GKDNVAAAHD
GKDIEYDTEF TIDNKVKKGD TMTINYDKNV IPSDLTDKND PIDITDPSGE VIAKGTFDKA
TKQITYTFTD YVDKYEDIKA RLTLYSYIDK QAVPNETSLN LTFATAGKET SQNVSVDYQD
PMVHGDSNIQ SIFTKLDENK QTIEQQIYVN PLKKTATNTK VDIAGSQVDD YGNIKLGNGS
TIIDQNTEIK VYKVNPNQQL PQSNRIYDFS QYEDVTSQFD NKKSFSNNVA TLDFGDINSA
YIIKVVSKYT PTSDGELDIA QGTSMRTTDK YGYYNYAGYS NFIVTSNDTG GGDGTVKPEE
KLYKIGDYVW EDVDKDGVQG TDSKEKPMAN VLVTLTYPDG TTKSVRTDAN GHYEFGGLKD
GETYTVKFET PAGYLPTKVN GTTDGEKDSN GSSITVKING KDDMSLDTGF YKEPKYNLGD
YVWEDTNKDG IQDANEPGIK DVKVTLKDST GKVIGTTTTD ASGKYKFTDL DNGNYTVEFE
TPAGYTPTVK NTTAEDKDSN GLTTTGVIKD ADNMTLDSGF YKTPKYSLGD YVWYDSNKDG
KQDSTEKGIK DVKVTLLNEK GEVIGTTKTD ENGKYRFDNL DSGKYKVIFE KPAGLTQTVT
NTTEDDKDAD GGEVDVTITD HDDFTLDNGY FEEDTSDSDS DSDSDSDSDS DSDSDSDSDS
DSDSDSDSDS DSDSDSDSDS DSDSDSDSDS DSDSDSDSDS DSDSDSDSDS DSDSNSDSDS
DSDSDSDSDS DSDSDSDSDS DSDSDSDSDS DSDSDSDSDS DSDSDSDSDS DSDSDSDSDS
DSDSDSDSDS DSDAGKHTPV KPMSTTKDHH NKAKALPETG SENNGSNNAT LFGGLFAALG
SLLLFGRRKK QNK
|
|---|
| |