Gene SaurJH1_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaurJH1_0188 
Symbol 
ID5316666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus aureus subsp. aureus JH1 
KingdomBacteria 
Replicon accessionNC_009632 
Strand+ 
Start bp221049 
End bp221729 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content31% 
IMG OID640778258 
ProductABC transporter related 
Protein accessionYP_001315337 
Protein GI150392662 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAT TAAAGAATGT TTATAGGACT TTTAAAAACG GTGATAAAAA TATTCGAGTT 
TTAAAAGACA TTAATATACA TATCAATGCA GGTGAATTCA TAGCGATTAT GGGACCATCA 
GGCTCAGGGA AGAGCACACT GATTAATATC TTAGGATTTA TAGATCGAGA GTATCATGGT 
GAATATTTGT TTGAAGGAAG TAATTATCAG ACACAATCTG ATAATCAATT GGCAAACATA 
AGAAATAAAA CAGTTGGATT TGTTTTTCAA AATTTTAAAC TAATTCATAA TAATACTATT 
TTAGAAAATA TAAGTATGCC ACTGGTATAT ACAAATATGA ATACGATAGA ACGAAAGAAT 
AAAGTTATGA CTGTGCTCAG TGCTGTAGGC CTAGATGGCA AAGGTGATTT TACTCCTAGT 
AAACTATCAG GCGGTCAACA ACAACGTGTT GCAATTGCGC GAGCCATTAT AAATAATCCA 
AAGTTTATTA TTGCAGATGA GCCAACGGGT GCTTTGGATT CAGATACATC TAAAATTATT 
ATGGACATAT TTACATCATT AAACCGAGAT AATCATACTA CAATTATTTT AGTCACACAT 
GATCGTAAAG TAGCAGAAAA AGCTGATCGA ATAATTCATA TTTTGGATGG TCGTATACAA 
CATGAAGAGG TGATTAAATG A
 
Protein sequence
MIELKNVYRT FKNGDKNIRV LKDINIHINA GEFIAIMGPS GSGKSTLINI LGFIDREYHG 
EYLFEGSNYQ TQSDNQLANI RNKTVGFVFQ NFKLIHNNTI LENISMPLVY TNMNTIERKN 
KVMTVLSAVG LDGKGDFTPS KLSGGQQQRV AIARAIINNP KFIIADEPTG ALDSDTSKII 
MDIFTSLNRD NHTTIILVTH DRKVAEKADR IIHILDGRIQ HEEVIK