Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_3961 |
Symbol | |
ID | 5077491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_009426 |
Strand | - |
Start bp | 132704 |
End bp | 133249 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640481067 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001165729 |
Protein GI | 146275568 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAACA GGCAGCAAAG CGAGACAAGC CGCGGCGAGT TGATCCTCGC CGCGCAGGGC GGTGACAGTG TCGCCATCGG CCGCCTGCTC GCCAGCTGCC AGAACGACAT CCGCCGCTAT GCCCGGCGGC ACTGTGCCGC CAGCGACATC GACGATGCCG TCCAGGAAAC CCTGCTGGTG ATCACCCGCA AGGTCGCGAG CCTCAGGGCC GCGGCGGCGT TCACGGGCTG GCTGTTCACC GTCATCCGCC GCGAGTGCCA GCGGCTTGCC CGCGCGATGC TCAGCCAGGG TGCCGAACCG CTCGATGTGG CCGAACAGCG GATCTGCACG CTTCCCGACG AAACCCTGCG GCTCGATGTC GCCGCCGCGC TGGAATCGCT GCCGGCGCAC TACCTCGAGG TGATCCTGCT GCGCGATTTC GAGGAACTGA CGATCGCCGA GATCGCCGGG CGGCTCCATG AGCCGGCAGG GGCGATCAAG AGCCGCCTGC ACCGCGCCCG CGCGCTGGTG CGCGAATACC TCTCGCACGA GGCGGCAACG CCTTAG
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Protein sequence | MGNRQQSETS RGELILAAQG GDSVAIGRLL ASCQNDIRRY ARRHCAASDI DDAVQETLLV ITRKVASLRA AAAFTGWLFT VIRRECQRLA RAMLSQGAEP LDVAEQRICT LPDETLRLDV AAALESLPAH YLEVILLRDF EELTIAEIAG RLHEPAGAIK SRLHRARALV REYLSHEAAT P
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