Gene Saro_3932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_3932 
Symbol 
ID5077416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_009426 
Strand
Start bp108225 
End bp109127 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content63% 
IMG OID640481038 
Producthypothetical protein 
Protein accessionYP_001165700 
Protein GI146275539 
COG category[L] Replication, recombination and repair 
COG ID[COG4227] Antirestriction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGAT CCCACCCTGT GACGCCGCGA GCCGACGTCT ATTCGCGCAT CACCACCGAG 
ATTGTCTCTG CCATCGAAGC AGGCGCCGAC GACTGGCGCA TGCCTTGGCA CCATGATGGC
GCTGCCACGA CCAGGCCGCA GAACGTCACC TCCCGCCGCC GCTATCGCGG TGTCAATGTG
CTGGCGCTTT GGATTGCCGC TGAAGCCAGC AGCTATTCCA GTGGTCTTTG GGGGACCTAT
CGCCAGTGGG CAGCTCTTGG TGCACAAGTC CGCAAGGGTG AGCGCGGAAC CACCGTCGTG
TTCTGGAAGC AGGCTGCATC GCGCGCCGTT GATGATCATG ACGACGGCGA AGCCGGCCCC
GGCCGCATGT TCGCCCGGGC CTTCACCGTG TTCAACCTCG CACAGGTCGA GGGCTATGAG
CCCGCTCCTG TCGCGGTATT GACCGAGAGC GAGCGGTTCG AACATGCCGA GGCATTCGTG
GCGGCTCTGA AGATTCCGAT CACCGAAGGC GCCTACGATG CGCACTACCG GATCGATCTC
GATCACATCT TCATGCCAAC CTTTTCCGCG TTTCGGGATG CAACGGCGCA GATGGGCACC
CTTCTGCACG AAGCCGGCCA CGCTACGGGC GCAAAGCACA GGCTCGACCG CAATTTTGCC
GAGAGGTTCA AGCGCGACAG TCTGGCGATT GAGGAGATCT GCGCCGAACT GACAGCTTCG
TTTGTGCTCG CCGACCTCGG GATCGCCCAC CATCCGCGCG CCGATCATGC CGCATACGTG
GCATCGTGGT TGCGCGTGCT GAAGGACGAC CCTCGCGCCA TCTTCACCGC CGCAAGCAAG
GCACAGGCCG CAGCCGACTG GATGCACGCC CAGCAACCTC AGCCCGAGGA GCTGGCGGCA
TGA
 
Protein sequence
MSRSHPVTPR ADVYSRITTE IVSAIEAGAD DWRMPWHHDG AATTRPQNVT SRRRYRGVNV 
LALWIAAEAS SYSSGLWGTY RQWAALGAQV RKGERGTTVV FWKQAASRAV DDHDDGEAGP
GRMFARAFTV FNLAQVEGYE PAPVAVLTES ERFEHAEAFV AALKIPITEG AYDAHYRIDL
DHIFMPTFSA FRDATAQMGT LLHEAGHATG AKHRLDRNFA ERFKRDSLAI EEICAELTAS
FVLADLGIAH HPRADHAAYV ASWLRVLKDD PRAIFTAASK AQAAADWMHA QQPQPEELAA